RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	ZNF830	Q96NB3	372 aa	Predicted RBP	14.01	□□□□□ -0.17
PTPN7-215	ENST00000492451	PSKH2	Q96QS6	385 aa		14.01	□□□□□ -0.17
PTPN7-215	ENST00000492451	LACRT	Q9GZZ8	138 aa		14.01	□□□□□ -0.17
PTPN7-215	ENST00000492451	MIR1-1HG	Q9H1L0	117 aa		14.01	□□□□□ -0.17
PTPN7-215	ENST00000492451	HAUS2	Q9NVX0	235 aa		14.01	□□□□□ -0.17
PTPN7-215	ENST00000492451	SALL4	Q9UJQ4	1053 aa		14.01	□□□□□ -0.17
PTPN7-215	ENST00000492451	SLC6A14	Q9UN76	642 aa		14.01	□□□□□ -0.17
PTPN7-215	ENST00000492451	DUSP10	Q9Y6W6	482 aa		14.01	□□□□□ -0.17
PTPN7-215	ENST00000492451	LAMA1	P25391	3075 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	ATXN2	Q99700	1313 aa	Known RBP	14	□□□□□ -0.17
PTPN7-215	ENST00000492451		A0A1B0GTW7	788 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	PLK4	O00444	970 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	APOL1	O14791	398 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	MFSD11	O43934	449 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	ZRANB2	O95218	330 aa	Known RBP eCLIP	14	□□□□□ -0.17
PTPN7-215	ENST00000492451	CFI	P05156	583 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	SERPINF2	P08697	491 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	CD27	P26842	260 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	MAOB	P27338	520 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	GARS	P41250	739 aa	Known RBP	14	□□□□□ -0.17
PTPN7-215	ENST00000492451	MAPK8	P45983	427 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	ZNF235	Q14590	738 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	TRIM61	Q5EBN2	209 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	PIP5KL1	Q5T9C9	394 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	MARC1	Q5VT66	337 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	SLC9A4	Q6AI14	798 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	TIGD7	Q6NT04	549 aa	Predicted RBP	14	□□□□□ -0.17
PTPN7-215	ENST00000492451	LRRC8A	Q8IWT6	810 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	TP53INP2	Q8IXH6	220 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	KATNAL2	Q8IYT4	538 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	RCOR2	Q8IZ40	523 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	TSEN2	Q8NCE0	465 aa	Known RBP	14	□□□□□ -0.17
PTPN7-215	ENST00000492451	HCAR2	Q8TDS4	363 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	FATE1	Q969F0	183 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	RNF25	Q96BH1	459 aa	Predicted RBP	14	□□□□□ -0.17
PTPN7-215	ENST00000492451	TSGA13	Q96PP4	275 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	TUBGCP5	Q96RT8	1024 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	DESI2	Q9BSY9	194 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	TSGA10	Q9BZW7	698 aa		14	□□□□□ -0.17
PTPN7-215	ENST00000492451	EIF2B4	Q9UI10	523 aa	Known RBP	14	□□□□□ -0.17
PTPN7-215	ENST00000492451	PI4KA	P42356	2102 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	CCDC66	A2RUB6	948 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	C16orf96	A6NNT2	1141 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	BCAT2	O15382	392 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	UGT2B4	P06133	528 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	IGHV4-34	P06331	123 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	ADRB3	P13945	408 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	CCNC	P24863	283 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	GK	P32189	559 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	SUOX	P51687	545 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	TAS2R38	P59533	333 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	SLC10A7	Q0GE19	358 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	TFDP2	Q14188	446 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	STPG1	Q5TH74	334 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	BZW1	Q7L1Q6	419 aa	Known RBP	13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	SRL	Q86TD4	932 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	PRPF39	Q86UA1	669 aa	Known RBP	13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	ZSCAN30	Q86W11	494 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	TRIM69	Q86WT6	500 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	RFX6	Q8HWS3	928 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	SYCE1	Q8N0S2	351 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	RNF10	Q8N5U6	811 aa	Known RBP	13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	EXD1	Q8NHP7	514 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	RBM41	Q96IZ5	413 aa	Known RBP	13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	EXOC2	Q96KP1	924 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	ZNF641	Q96N77	438 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	KLHL32	Q96NJ5	620 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	GOLPH3	Q9H4A6	298 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	ATP13A3	Q9H7F0	1226 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	DKK3	Q9UBP4	350 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	ADGRG1	Q9Y653	693 aa		13.99	□□□□□ -0.17
PTPN7-215	ENST00000492451	SHROOM3	Q8TF72	1996 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451		A0A1W2PPC4	97 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	LNP1	A1A4G5	178 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	MACROD2	A1Z1Q3	448 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	C10orf142	B7Z368	130 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	RNF103	O00237	685 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	MATN3	O15232	486 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	LAT	O43561	262 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	AP1G1	O43747	822 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	KRT86	O43790	486 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	PEX11B	O96011	259 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	SYP	P08247	313 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	SERPINA4	P29622	427 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	CTNNA1	P35221	906 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	CDKN2B	P42772	138 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	MMP13	P45452	471 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	NR2C2	P49116	596 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	AFF3	P51826	1226 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	LIMK1	P53667	647 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	COPS2	P61201	443 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	AP1S1	P61966	158 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	IRX4	P78413	519 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	GBE1	Q04446	702 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	HNRNPD	Q14103	355 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	TEAD4	Q15561	434 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	TAZ	Q16635	292 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	TFDP3	Q5H9I0	405 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	PPM1J	Q5JR12	505 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	RALGPS1	Q5JS13	557 aa		13.98	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms