RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 IGLON5A6NGN9 336 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 FGF10O15520 208 aaPredicted RBP18.26■□□□□ 0.51
HMGN1-219ENST00000491183 TSPAN6O43657 245 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 DESP17661 470 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 HTR7P34969 479 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 PBX1P40424 430 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 TPI1P60174 286 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 FANCCQ00597 558 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 ERMARDQ5T6L9 678 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 GDPD4Q6W3E5 623 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 Q6ZSR6 202 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 KLF6Q99612 283 aaPredicted RBP18.26■□□□□ 0.51
HMGN1-219ENST00000491183 SNRNP25Q9BV90 132 aaKnown RBP18.26■□□□□ 0.51
HMGN1-219ENST00000491183 CALN1Q9BXU9 219 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 OSBPL1AQ9BXW6 950 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 SLC39A8Q9C0K1 460 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 ISCUQ9H1K1 167 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 PDFQ9HBH1 243 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 LHX3Q9UBR4 397 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 MFHAS1Q9Y4C4 1052 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 PCDHGA1Q9Y5H4 931 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 FAM149AA5PLN7 773 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 J3KR12 359 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 AREL1O15033 823 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 INSIG1O15503 277 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 ITIH2P19823 946 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 MIPP30301 263 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 ACADVLP49748 655 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 RHOAP61586 193 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 HGSNATQ68CP4 663 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 GALNT15Q8N3T1 639 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 FNIP1Q8TF40 1166 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 ZNF653Q96CK0 615 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 CELF6Q96J87 481 aaKnown RBP18.25■□□□□ 0.51
HMGN1-219ENST00000491183 GDAP1L1Q96MZ0 367 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 LENG8Q96PV6 779 aaPredicted RBP18.25■□□□□ 0.51
HMGN1-219ENST00000491183 KCTD15Q96SI1 283 aaPredicted RBP18.25■□□□□ 0.51
HMGN1-219ENST00000491183 GPR27Q9NS67 375 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 UCKL1Q9NWZ5 548 aa18.25■□□□□ 0.51
HMGN1-219ENST00000491183 A6NNZ2 444 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 EEF2KO00418 725 aaKnown RBP18.24■□□□□ 0.51
HMGN1-219ENST00000491183 TRIM38O00635 465 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 RNF8O76064 485 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 IGSF6O95976 241 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 GIMD1P0DJR0 217 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 DGKAP23743 735 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 NDST2P52849 883 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 CAMK2BQ13554 666 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 LRRC73Q5JTD7 316 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 KYAT3Q6YP21 454 aaKnown RBP18.24■□□□□ 0.51
HMGN1-219ENST00000491183 KDM7AQ6ZMT4 941 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 TTC7BQ86TV6 843 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 FAM174AQ8TBP5 190 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 ASB12Q8WXK4 309 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 EXOC2Q96KP1 924 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 MYO1AQ9UBC5 1043 aa18.24■□□□□ 0.51
HMGN1-219ENST00000491183 GOLGA4Q13439 2230 aaKnown RBP18.24■□□□□ 0.51
HMGN1-219ENST00000491183 A0A1W2PQJ5 194 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 EIF3CLB5ME19 914 aaKnown RBP18.23■□□□□ 0.51
HMGN1-219ENST00000491183 NEMP1O14524 444 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 PRAMEF11O60813 436 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 LRCH4O75427 683 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 C1SP09871 688 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 TIMP2P16035 220 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 ERCC2P18074 760 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 PAPOLAP51003 745 aaKnown RBP18.23■□□□□ 0.51
HMGN1-219ENST00000491183 CLDN6P56747 220 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 UBASH3AP57075 661 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 RAD51Q06609 339 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 SGCGQ13326 291 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 PROX2Q3B8N5 592 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 ZNF542PQ5EBM4 170 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 AFMIDQ63HM1 303 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 RFX8Q6ZV50 586 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 ZSCAN30Q86W11 494 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 PROSER1Q86XN7 944 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 DCP2Q8IU60 420 aaKnown RBP18.23■□□□□ 0.51
HMGN1-219ENST00000491183 ARHGAP12Q8IWW6 846 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 MDM1Q8TC05 714 aa18.23■□□□□ 0.51
HMGN1-219ENST00000491183 EIF3CQ99613 913 aaKnown RBP18.23■□□□□ 0.51
HMGN1-219ENST00000491183 CPEB1Q9BZB8 566 aaKnown RBP18.23■□□□□ 0.51
HMGN1-219ENST00000491183 UBA2Q9UBT2 640 aaPredicted RBP18.23■□□□□ 0.51
HMGN1-219ENST00000491183 TRABD2BA6NFA1 517 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 SIGLEC6O43699 453 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 PRPSAP2O60256 369 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 RFPL3O75679 317 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 PIAS2O75928 621 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 PIGNO95427 931 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 CKMT2P17540 419 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 ZNF211Q13398 564 aaPredicted RBP18.22■□□□□ 0.51
HMGN1-219ENST00000491183 FZD2Q14332 565 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 TPRG1LQ5T0D9 272 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 PTAR1Q7Z6K3 402 aaPredicted RBP18.22■□□□□ 0.51
HMGN1-219ENST00000491183 TMPRSS12Q86WS5 348 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 CENPTQ96BT3 561 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 IFT43Q96FT9 208 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 CCDC86Q9H6F5 360 aaKnown RBP18.22■□□□□ 0.51
HMGN1-219ENST00000491183 DONSONQ9NYP3 566 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 CWC15Q9P013 229 aaKnown RBP18.22■□□□□ 0.51
HMGN1-219ENST00000491183 DKK3Q9UBP4 350 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms