RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 TOMM40O96008 361 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 URODP06132 367 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 GALTP07902 379 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 HOXB2P14652 356 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 PTPN2P17706 415 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 KRT9P35527 623 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 ARL1P40616 181 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 RFX2P48378 723 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 CENPAP49450 140 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 TUBP50607 506 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 CLCN5P51795 746 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 CYP4A11Q02928 519 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 POU5F1BQ06416 359 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 TBX2Q13207 712 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 G3BP1Q13283 466 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 PLEKHO1Q53GL0 409 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 DCAF6Q58WW2 860 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 ZNF667Q5HYK9 610 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 FNBP1LQ5T0N5 605 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 SERTAD4-AS1Q5TG53 156 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 TMEM81Q6P7N7 255 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 MON1BQ7L1V2 547 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 PATL1Q86TB9 770 aaKnown RBP5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 TBC1D26Q86UD7 250 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 ARMC8Q8IUR7 673 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 RBFAQ8N0V3 343 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 TSPYL6Q8N831 410 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 MIGA1Q8NAN2 632 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 TMEM163Q8TC26 289 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 ASB5Q8WWX0 329 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 RRP36Q96EU6 259 aaKnown RBP5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 YME1L1Q96TA2 773 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 SLC26A6Q9BXS9 759 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 NUF2Q9BZD4 464 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 NPFFR1Q9GZQ6 430 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 PAIP1Q9H074 479 aaKnown RBP5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 MVB12BQ9H7P6 319 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 JMJD4Q9H9V9 463 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 KIAA1456Q9P272 454 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 CYP46A1Q9Y6A2 500 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 OR6C75A6NL08 312 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 BECN2A8MW95 431 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 CHL1O00533 1208 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 EBAG9O00559 213 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 ASAP2O43150 1006 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 SPRY3O43610 288 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 CBSLP0DN79 551 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 SNHG28P0DPA3 235 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 COX7A2P14406 83 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 ABCD3P28288 659 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 CBSP35520 551 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 UFM1P61960 85 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 NEXNQ0ZGT2 675 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 ITGADQ13349 1161 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 INTS11Q5TA45 600 aaKnown RBP5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 SLC9C2Q5TAH2 1124 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 ZNF367Q7RTV3 350 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 KIAA2013Q8IYS2 634 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 PLD5Q8N7P1 536 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 TEX45Q8NA69 505 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 IL17REQ8NFR9 667 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 PPM1MQ96MI6 270 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 SIN3AQ96ST3 1273 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 PDCL3Q9H2J4 239 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 PREBQ9HCU5 417 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 PLK2Q9NYY3 685 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 MPP6Q9NZW5 540 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 SLC25A10Q9UBX3 287 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 MYO6Q9UM54 1294 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 CARD8Q9Y2G2 431 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 PAM16Q9Y3D7 125 aa5.12□□□□□ -1.59
HMGB1P38-201ENST00000490557 SPTLC2O15270 562 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 TACC1O75410 805 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 IRF1P10914 325 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 MYF6P23409 242 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 HOXD3P31249 432 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 ELF1P32519 619 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 CTCFP49711 727 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 LPIN1Q14693 890 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 ARHGEF6Q15052 776 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 PPP2R5BQ15173 497 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 Q6ZSV7 163 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 MCPH1Q8NEM0 835 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 OIT3Q8WWZ8 545 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 ZUFSPQ96AP4 578 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 KLHL29Q96CT2 875 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 SAAL1Q96ER3 474 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 BBS4Q96RK4 519 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 DCLK3Q9C098 648 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 SLC25A18Q9H1K4 315 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 EBF3Q9H4W6 596 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 IRAK4Q9NWZ3 460 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 KCND2Q9NZV8 630 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 IL36RNQ9UBH0 155 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 CTNNAL1Q9UBT7 734 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 TMEM98Q9Y2Y6 226 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 PTGDR2Q9Y5Y4 395 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 TTC3P53804 2025 aa5.11□□□□□ -1.59
HMGB1P38-201ENST00000490557 A0A1B0GVT2 93 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms