RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 RNF111Q6ZNA4 994 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 PDZD4Q76G19 769 aaPredicted RBP13.5□□□□□ -0.25
CHD1L-208ENST00000488864 NCSTNQ92542 709 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 MRPS31Q92665 395 aaKnown RBP13.5□□□□□ -0.25
CHD1L-208ENST00000488864 ZNF707Q96C28 371 aaPredicted RBP13.5□□□□□ -0.25
CHD1L-208ENST00000488864 FCRL2Q96LA5 508 aaPredicted RBP13.5□□□□□ -0.25
CHD1L-208ENST00000488864 CCDC106Q9BWC9 280 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 PRKD2Q9BZL6 878 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 C20orf27Q9GZN8 174 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 SMG9Q9H0W8 520 aaKnown RBP13.5□□□□□ -0.25
CHD1L-208ENST00000488864 ANAPC1Q9H1A4 1944 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 PRR5-ARHGAP8B1AHC4 643 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 TRIM49D1C9J1S8 452 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 SOX1O00570 391 aaPredicted RBP13.5□□□□□ -0.25
CHD1L-208ENST00000488864 COPEO14579 308 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 NDC80O14777 642 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 KLF11O14901 512 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 XYLBO75191 536 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 PAGE1O75459 146 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 GLP2RO95838 553 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 INHBAP08476 426 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 SRGAP2BP0DMP2 458 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 MBL2P11226 248 aaPredicted RBP13.5□□□□□ -0.25
CHD1L-208ENST00000488864 PTPN2P17706 415 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 HDCP19113 662 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 GRIA2P42262 883 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 AQP5P55064 265 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 ARHGAP8P85298 464 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 ZXDBP98169 803 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 UBAP2LQ14157 1087 aaKnown RBP13.5□□□□□ -0.25
CHD1L-208ENST00000488864 LRRC36Q1X8D7 754 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 RFX6Q8HWS3 928 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 NETO2Q8NC67 525 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 ING5Q8WYH8 240 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 MTBPQ96DY7 904 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 SLC39A13Q96H72 371 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 LRCH3Q96II8 777 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 NDNQ99608 321 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 OR12D3Q9UGF7 316 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 IKBKGQ9Y6K9 419 aa13.5□□□□□ -0.25
CHD1L-208ENST00000488864 CKMP06732 381 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 TMPRSS15P98073 1019 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 KCNC3Q14003 757 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 CBX2Q14781 532 aaPredicted RBP13.49□□□□□ -0.25
CHD1L-208ENST00000488864 TRIP4Q15650 581 aaPredicted RBP13.49□□□□□ -0.25
CHD1L-208ENST00000488864 MAP7D3Q8IWC1 876 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 CCDC33Q8N5R6 958 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 SMG7Q92540 1137 aaKnown RBP13.49□□□□□ -0.25
CHD1L-208ENST00000488864 WBP2Q969T9 261 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 NTAN1Q96AB6 310 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 NSUN3Q9H649 340 aaKnown RBP13.49□□□□□ -0.25
CHD1L-208ENST00000488864 MFHAS1Q9Y4C4 1052 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 A0A088AWK7 358 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 CXorf49A8MYA2 514 aaPredicted RBP13.49□□□□□ -0.25
CHD1L-208ENST00000488864 HNRNPA1P09651 372 aaKnown RBP eCLIP13.49□□□□□ -0.25
CHD1L-208ENST00000488864 IGFBP4P22692 258 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 HOXA9P31269 272 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 PPP3CCP48454 512 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 PDE1BQ01064 536 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 PDK2Q15119 407 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 TEAD2Q15562 447 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 CHI3L2Q15782 390 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 SFT2D3Q587I9 215 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 CFAP157Q5JU67 520 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 RARS2Q5T160 578 aaKnown RBP13.49□□□□□ -0.25
CHD1L-208ENST00000488864 C6orf163Q5TEZ5 329 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 TMCO4Q5TGY1 634 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 LPCAT4Q643R3 524 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 PCDH19Q8TAB3 1148 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 PPP2R3CQ969Q6 453 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 E2F7Q96AV8 911 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 CSPG4P5Q96PW8 444 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 GCNAQ96QF7 691 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 EBF4Q9BQW3 602 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 ZDHHC7Q9NXF8 308 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 ARHGEF38Q9NXL2 777 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 DPP7Q9UHL4 492 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 TBC1D30Q9Y2I9 924 aa13.49□□□□□ -0.25
CHD1L-208ENST00000488864 KCNU1A8MYU2 1149 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 UGT1A9O60656 530 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 SORBS2O94875 1100 aaKnown RBP13.48□□□□□ -0.25
CHD1L-208ENST00000488864 APOEP02649 317 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 C1QAP02745 245 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 STIP1P31948 543 aaKnown RBP13.48□□□□□ -0.25
CHD1L-208ENST00000488864 ARL4AP40617 200 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 SCAPQ12770 1279 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 ADGRE1Q14246 886 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 PPP2R5DQ14738 602 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 BRMS1LQ5PSV4 323 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 GPR158Q5T848 1215 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 NPNTQ6UXI9 565 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 BBS12Q6ZW61 710 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 PPM1NQ8N819 430 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.48□□□□□ -0.25
CHD1L-208ENST00000488864 LRRN4Q8WUT4 740 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 PYDC1Q8WXC3 89 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 CFAP36Q96G28 342 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 C7orf26Q96N11 449 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 RNF157Q96PX1 679 aa13.48□□□□□ -0.25
CHD1L-208ENST00000488864 CDK5RAP1Q96SZ6 601 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms