RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ZNF304Q9HCX3 659 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 PLK2Q9NYY3 685 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 GRHL1Q9NZI5 618 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 NCKIPSDQ9NZQ3 722 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 IFT80Q9P2H3 777 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-214ENST00000488427 UPB1Q9UBR1 384 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 CD207Q9UJ71 328 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 RCE1Q9Y256 329 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 CNPY2Q9Y2B0 182 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 DNAJC16Q9Y2G8 782 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 SRPRBQ9Y5M8 271 aaKnown RBP4.65□□□□□ -1.67
ITGB1-214ENST00000488427 CEP152O94986 1710 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 CACNA1IQ9P0X4 2223 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 TMEM2Q9UHN6 1383 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 PTPN23Q9H3S7 1636 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 DCCP43146 1447 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 MYOM2P54296 1465 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 ARHGEF28Q8N1W1 1705 aaKnown RBP4.64□□□□□ -1.67
ITGB1-214ENST00000488427 RGPD3A6NKT7 1758 aaPredicted RBP4.64□□□□□ -1.67
ITGB1-214ENST00000488427 RGPD4Q7Z3J3 1758 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 SLIT2O94813 1529 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 H0YGN5 161 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 VWA5AO00534 786 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 CBX6O95503 412 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 DDAH2O95865 285 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 TOMM40O96008 361 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 CYP21A2P08686 494 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 CPA1P15085 419 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 ARSAP15289 507 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 RFC1P35251 1148 aaPredicted RBP4.64□□□□□ -1.67
ITGB1-214ENST00000488427 P2RX3P56373 397 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 ZP1P60852 638 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 UBE3AQ05086 875 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 FOXD4Q12950 439 aaPredicted RBP4.64□□□□□ -1.67
ITGB1-214ENST00000488427 MAPK7Q13164 816 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 RAPGEF1Q13905 1077 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 LEXMQ3ZCV2 418 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 LRRC24Q50LG9 513 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 DNTTIP2Q5QJE6 756 aaKnown RBP4.64□□□□□ -1.67
ITGB1-214ENST00000488427 GJB7Q6PEY0 223 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 RNF144BQ7Z419 303 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 SERPINA11Q86U17 422 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 TMEM217Q8N7C4 229 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 LRRC57Q8N9N7 239 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 C7orf57Q8NEG2 295 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 ZMIZ2Q8NF64 920 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 CMASQ8NFW8 434 aaPredicted RBP4.64□□□□□ -1.67
ITGB1-214ENST00000488427 TMEM163Q8TC26 289 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 SLC35F5Q8WV83 523 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 ZBTB9Q96C00 473 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 MSI2Q96DH6 328 aaKnown RBP4.64□□□□□ -1.67
ITGB1-214ENST00000488427 TMEM204Q9BSN7 226 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 SIRT3Q9NTG7 399 aaPredicted RBP4.64□□□□□ -1.67
ITGB1-214ENST00000488427 SEL1LQ9UBV2 794 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 PCDHGB3Q9Y5G1 929 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 DGKBQ9Y6T7 804 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 MAP3K5Q99683 1374 aa4.64□□□□□ -1.67
ITGB1-214ENST00000488427 MST1RQ04912 1400 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 NEXMIFQ5QGS0 1516 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 A0A1W2PPC1 479 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 MS4A18H0YCH9 400 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 PEX12O00623 359 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 IFIT1P09914 478 aaKnown RBP4.63□□□□□ -1.67
ITGB1-214ENST00000488427 ARSBP15848 533 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 TNFSF8P32971 234 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 AVPR1AP37288 418 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 VAMP2P63027 116 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 ZBTB16Q05516 673 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 DSC1Q08554 894 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 GPR18Q14330 331 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 IL13RA2Q14627 380 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 DCAF6Q58WW2 860 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 WASHC2DQ5SRD0 308 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 MAP3K21Q5TCX8 1036 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 C9orf47Q6ZRZ4 202 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 SLC16A12Q6ZSM3 486 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 HERC6Q8IVU3 1022 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 LINS1Q8NG48 757 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 LYZL4Q96KX0 146 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 GFM1Q96RP9 751 aaKnown RBP4.63□□□□□ -1.67
ITGB1-214ENST00000488427 RMI1Q9H9A7 625 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 MAP6D1Q9H9H5 199 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 MRPL44Q9H9J2 332 aaKnown RBP4.63□□□□□ -1.67
ITGB1-214ENST00000488427 IL21RQ9HBE5 538 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 ITM2CQ9NQX7 267 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 IL36RNQ9UBH0 155 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 CDH22Q9UJ99 828 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 FZD10Q9ULW2 581 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 ABCC5O15440 1437 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 CLIP1P30622 1438 aa4.63□□□□□ -1.67
ITGB1-214ENST00000488427 RPRD2Q5VT52 1461 aaKnown RBP4.62□□□□□ -1.67
ITGB1-214ENST00000488427 ADGRB3O60242 1522 aa4.62□□□□□ -1.67
ITGB1-214ENST00000488427 EFCAB6Q5THR3 1501 aa4.62□□□□□ -1.67
ITGB1-214ENST00000488427 USP32Q8NFA0 1604 aa4.62□□□□□ -1.67
ITGB1-214ENST00000488427 OR6C75A6NL08 312 aa4.62□□□□□ -1.67
ITGB1-214ENST00000488427 PROB1E7EW31 1015 aa4.62□□□□□ -1.67
ITGB1-214ENST00000488427 STMND1H3BQB6 276 aa4.62□□□□□ -1.67
ITGB1-214ENST00000488427 PIP5K1CO60331 668 aa4.62□□□□□ -1.67
ITGB1-214ENST00000488427 CHRM4P08173 479 aa4.62□□□□□ -1.67
ITGB1-214ENST00000488427 T-ENOLP0DO92 83 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms