RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 BTBD1Q9H0C5 482 aa15.94■□□□□ 0.14
C9orf3-219ENST00000488186 USP36Q9P275 1121 aaKnown RBP15.94■□□□□ 0.14
C9orf3-219ENST00000488186 AMACRQ9UHK6 382 aa15.94■□□□□ 0.14
C9orf3-219ENST00000488186 WASF2Q9Y6W5 498 aa15.94■□□□□ 0.14
C9orf3-219ENST00000488186 NYNRINQ9P2P1 1898 aaKnown RBP15.94■□□□□ 0.14
C9orf3-219ENST00000488186 IGHV1OR15-9A0A0B4J2B8 117 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.93■□□□□ 0.14
C9orf3-219ENST00000488186 INSIG1O15503 277 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 ZNF189O75820 626 aaPredicted RBP15.93■□□□□ 0.14
C9orf3-219ENST00000488186 RHOBTB1O94844 696 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 LMNAP02545 664 aaKnown RBP15.93■□□□□ 0.14
C9orf3-219ENST00000488186 ATP1A1P05023 1023 aaKnown RBP15.93■□□□□ 0.14
C9orf3-219ENST00000488186 CTSLP07711 333 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 RBP3P10745 1247 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 SERPINA4P29622 427 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 MAXP61244 160 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 AP1S1P61966 158 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 RPL6Q02878 288 aaKnown RBP15.93■□□□□ 0.14
C9orf3-219ENST00000488186 ELF2Q15723 593 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 LONRF2Q1L5Z9 754 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 SLC45A4Q5BKX6 768 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 ZNF805Q5CZA5 627 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 LPCAT2Q7L5N7 544 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 FAM160A2Q8N612 972 aaPredicted RBP15.93■□□□□ 0.14
C9orf3-219ENST00000488186 SUMF1Q8NBK3 374 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 OR14C36Q8NHC7 312 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 HTR3CQ8WXA8 447 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 TOE1Q96GM8 510 aaKnown RBP15.93■□□□□ 0.14
C9orf3-219ENST00000488186 ZC3H10Q96K80 434 aaKnown RBP15.93■□□□□ 0.14
C9orf3-219ENST00000488186 KLHL32Q96NJ5 620 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 NUDCD1Q96RS6 583 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 TUBGCP5Q96RT8 1024 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 FAM118BQ9BPY3 351 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 MGME1Q9BQP7 344 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 HERPUD2Q9BSE4 406 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 NEUROG2Q9H2A3 272 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 SUV39H2Q9H5I1 410 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 SGK2Q9HBY8 427 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 KCND1Q9NSA2 647 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 FAM86C1Q9NVL1 165 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 USP34Q70CQ2 3546 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 GPR179Q6PRD1 2367 aa15.93■□□□□ 0.14
C9orf3-219ENST00000488186 TTC24A2A3L6 582 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 FAM47DPA6NHR8 397 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 LRRC72A6NJI9 287 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 MUSKO15146 869 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 FGGP02679 453 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 ITGB7P26010 798 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 RGRP47804 291 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 IFI35P80217 286 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 CNTN1Q12860 1018 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 PRKD1Q15139 912 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 RALGPS1Q5JS13 557 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 SPDYCQ5MJ68 293 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 ERN2Q76MJ5 926 aaKnown RBP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 TTC7BQ86TV6 843 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 C17orf53Q8N3J3 647 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 PGBD5Q8N414 524 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 AADATQ8N5Z0 425 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 FRMD1Q8N878 549 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 LOXL4Q96JB6 756 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 ZNF641Q96N77 438 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 AGAP3Q96P47 875 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 QKIQ96PU8 341 aaKnown RBP eCLIP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 NAP1L3Q99457 506 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 SEMA3CQ99985 751 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 GPR174Q9BXC1 333 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 CEP41Q9BYV8 373 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 FRMD8P1Q9BZ68 369 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 WSB2Q9NYS7 404 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 KLHL8Q9P2G9 620 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-219ENST00000488186 FZD4Q9ULV1 537 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 SHROOM3Q8TF72 1996 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 WDR87Q6ZQQ6 2873 aa15.92■□□□□ 0.14
C9orf3-219ENST00000488186 TBC1D3DA0A087WVF3 549 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 TBC1D3IA0A087WXS9 549 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 TBC1D3EA0A087X179 549 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 TBC1D3KA0A087X1G2 549 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 CTAGE9A4FU28 777 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 TBC1D3FA6NER0 549 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-219ENST00000488186 TBC1D3LB9A6J9 549 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 PLK4O00444 970 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 SLC7A4O43246 635 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 PIGNO95427 931 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 IGLV3-19P01714 112 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 TBC1D3HP0C7X1 549 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 CA4P22748 312 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 RBL1P28749 1068 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 NEK3P51956 506 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 METAP1P53582 386 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 POLR2LP62875 67 aaKnown RBP15.91■□□□□ 0.14
C9orf3-219ENST00000488186 ZBTB17Q13105 803 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 KLF1Q13351 362 aaPredicted RBP15.91■□□□□ 0.14
C9orf3-219ENST00000488186 TEX44Q53QW1 395 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 TBC1D3GQ6DHY5 549 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 TBC1D3CQ6IPX1 549 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 NCEH1Q6PIU2 408 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 PID1Q7Z2X4 250 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 CAMK1DQ8IU85 385 aa15.91■□□□□ 0.14
C9orf3-219ENST00000488186 TBC1D3Q8IZP1 549 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms