RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 COG1Q8WTW3 980 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 C1orf54Q8WWF1 131 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 ATG4AQ8WYN0 398 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 MS4A14Q96JA4 679 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 CAPZA3Q96KX2 299 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 AGAP3Q96P47 875 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 NUDCD1Q96RS6 583 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 TUBGCP5Q96RT8 1024 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 FAM129BQ96TA1 746 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 IL12RB2Q99665 862 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 SEMA3CQ99985 751 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 MGME1Q9BQP7 344 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 CEP41Q9BYV8 373 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 SLC6A17Q9H1V8 727 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 PABPC3Q9H361 631 aaKnown RBP11.54□□□□□ -0.56
NUP50-216ENST00000486184 ZNF148Q9UQR1 794 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 R3HDM2Q9Y2K5 976 aaKnown RBP11.54□□□□□ -0.56
NUP50-216ENST00000486184 A0A0C4DFX4 3053 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 CCDC163A0A0D9SF12 145 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 BCLAF3A2AJT9 711 aaKnown RBP11.53□□□□□ -0.56
NUP50-216ENST00000486184 ZNF185O15231 689 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 MID1O15344 667 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 INSIG1O15503 277 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 LIASO43766 372 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 RNASEH2AO75792 299 aaKnown RBP11.53□□□□□ -0.56
NUP50-216ENST00000486184 UGT2B4P06133 528 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 SERPINF2P08697 491 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 SP9P0CG40 484 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 XPAP23025 273 aaPredicted RBP11.53□□□□□ -0.56
NUP50-216ENST00000486184 PTPN3P26045 913 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 TNNT3P45378 269 aaPredicted RBP11.53□□□□□ -0.56
NUP50-216ENST00000486184 RGRP47804 291 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 CCNG2Q16589 344 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 POM121L1PQ3SYA9 428 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 TEX44Q53QW1 395 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 ZC3H14Q6PJT7 736 aaKnown RBP11.53□□□□□ -0.56
NUP50-216ENST00000486184 GDPD4Q6W3E5 623 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 GSTA5Q7RTV2 222 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 PID1Q7Z2X4 250 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 WDR5BQ86VZ2 330 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 MAML2Q8IZL2 1156 aaPredicted RBP11.53□□□□□ -0.56
NUP50-216ENST00000486184 PGBD5Q8N414 524 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 CPEB1Q9BZB8 566 aaKnown RBP11.53□□□□□ -0.56
NUP50-216ENST00000486184 IRF2BPLQ9H1B7 796 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 C10orf88Q9H8K7 445 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 CD248Q9HCU0 757 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 ZSCAN32Q9NX65 697 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 FBXL12Q9NXK8 326 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 RSPH14Q9UHP6 348 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 TRHDEQ9UKU6 1024 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 DNPEPQ9ULA0 475 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 PPM1HQ9ULR3 514 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 TTC7AQ9ULT0 858 aaPredicted RBP11.53□□□□□ -0.56
NUP50-216ENST00000486184 CYP8B1Q9UNU6 501 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 HCN4Q9Y3Q4 1203 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 WASF2Q9Y6W5 498 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 FANCMQ8IYD8 2048 aa11.53□□□□□ -0.56
NUP50-216ENST00000486184 THADAQ6YHU6 1953 aa11.52□□□□□ -0.56
NUP50-216ENST00000486184 A0A1W2PP55 124 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 MUSKO15146 869 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 NDUFS2O75306 463 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 PIGNO95427 931 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 CTSLP07711 333 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 NFKBIAP25963 317 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 ITGB7P26010 798 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 OXTRP30559 389 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 STIP1P31948 543 aaKnown RBP11.52□□□□□ -0.57
NUP50-216ENST00000486184 GKP32189 559 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 TPMTP51580 245 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 DSC2Q02487 901 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 LMNB2Q03252 620 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 DMWDQ09019 674 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 ZNF805Q5CZA5 627 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 FBXL19Q6PCT2 694 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 ARHGEF18Q6ZSZ5 1173 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 USP30Q70CQ3 517 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 CEP68Q76N32 757 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 FAM124AQ86V42 546 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 C11orf74Q86VG3 221 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 HDDC3Q8N4P3 179 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 CCDC89Q8N998 374 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 SLC35B2Q8TB61 432 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 PDCD6IPQ8WUM4 868 aaKnown RBP11.52□□□□□ -0.57
NUP50-216ENST00000486184 NKD2Q969F2 451 aaPredicted RBP11.52□□□□□ -0.57
NUP50-216ENST00000486184 LRRC45Q96CN5 670 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 TEKT5Q96M29 485 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 ZNF641Q96N77 438 aaPredicted RBP11.52□□□□□ -0.57
NUP50-216ENST00000486184 KLHL32Q96NJ5 620 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 TMEM121Q9BTD3 319 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 AP1M1Q9BXS5 423 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 ITM2CQ9NQX7 267 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 ATP8A1Q9Y2Q0 1164 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 PCDHGA2Q9Y5H1 932 aa11.52□□□□□ -0.57
NUP50-216ENST00000486184 A0A1W2PQ67 120 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 TTC24A2A3L6 582 aaPredicted RBP11.51□□□□□ -0.57
NUP50-216ENST00000486184 GOLGA6CA6NDK9 693 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 GOLGA6BA6NDN3 693 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 OPHN1O60890 802 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 SOCS5O75159 536 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms