RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 TRIM73Q86UV7 250 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 TMPRSS6Q8IU80 811 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 SYT12Q8IV01 421 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 CCDC117Q8IWD4 279 aaPredicted RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 DEFB106AQ8N104 65 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 AHI1Q8N157 1196 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 CARNMT1Q8N4J0 409 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.95□□□□□ -0.66
DDX56-212ENST00000485367 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 ARHGEF2Q92974 986 aaKnown RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 RNF34Q969K3 372 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 PRICKLE1Q96MT3 831 aaPredicted RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 MKRN2Q9H000 416 aaKnown RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 LRMDAQ9H2I8 198 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 RNPEPL1Q9HAU8 725 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 TMEM74BQ9NUR3 256 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 COX16Q9P0S2 106 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 WHRNQ9P202 907 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 XPO7Q9UIA9 1087 aaKnown RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 TMEM120BA0PK00 339 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 LNP1A1A4G5 178 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 LRRD1A4D1F6 860 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 C4orf47A7E2U8 309 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 HNRNPCL1O60812 293 aaKnown RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 SKAP2O75563 359 aaPredicted RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 ERBB2P04626 1255 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 ATP5BP06576 529 aaKnown RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 POLR2EP19388 210 aaKnown RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 ATP6V1C1P21283 382 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 RASSF2P50749 326 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 IRX4P78413 519 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 CAV1Q03135 178 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 ZNF33AQ06730 810 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 CALCOCO2Q13137 446 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 TRIM61Q5EBN2 209 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 MS4A13Q5J8X5 152 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 WASHC2DQ5SRD0 308 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 SEL1L2Q5TEA6 688 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 RAP1GAP2Q684P5 730 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 SLC30A9Q6PML9 568 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 KIAA0907Q7Z7F0 614 aaPredicted RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 CHSY1Q86X52 802 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 CACUL1Q86Y37 369 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 LGI2Q8N0V4 545 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 FITM2Q8N6M3 262 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 ZNF366Q8N895 744 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 ENDOVQ8N8Q3 282 aaKnown RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 PRELID2Q8N945 189 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 FIBINQ8TAL6 211 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 PRCCQ92733 491 aaPredicted RBP10.95□□□□□ -0.66
DDX56-212ENST00000485367 SIPA1Q96FS4 1042 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 BTN2A3PQ96KV6 586 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 SLC2A13Q96QE2 648 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 OSBPL1AQ9BXW6 950 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 OSGEPQ9NPF4 335 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 ASNSD1Q9NWL6 643 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 DDIT4Q9NX09 232 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 PILRBQ9UKJ0 227 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 LAMA1P25391 3075 aa10.95□□□□□ -0.66
DDX56-212ENST00000485367 FAM170AA1A519 330 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 MTA2O94776 668 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 IGLV3-25P01717 112 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 CFIP05156 583 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 DLDP09622 509 aaKnown RBP10.94□□□□□ -0.66
DDX56-212ENST00000485367 CYP11B1P15538 503 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 ACADSP16219 412 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 TACR2P21452 398 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 CD6P30203 668 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 MAN1A1P33908 653 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 DPP6P42658 865 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 SLC6A3Q01959 620 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 ROR2Q01974 943 aaKnown RBP10.94□□□□□ -0.66
DDX56-212ENST00000485367 PPARDQ03181 441 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 LMAN2Q12907 356 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 CDH18Q13634 790 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 TSNAXIP1Q2TAA8 658 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 PTPN20Q4JDL3 420 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 CCDC137Q6PK04 289 aaKnown RBP10.94□□□□□ -0.66
DDX56-212ENST00000485367 ATP6V0D2Q8N8Y2 350 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 ZNF557Q8N988 423 aaPredicted RBP10.94□□□□□ -0.66
DDX56-212ENST00000485367 TMEM35BQ8NCS4 154 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 DDX1Q92499 740 aaKnown RBP10.94□□□□□ -0.66
DDX56-212ENST00000485367 HSPA12BQ96MM6 686 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 TMEM245Q9H330 911 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 ITM2CQ9NQX7 267 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 LGALS13Q9UHV8 139 aa10.94□□□□□ -0.66
DDX56-212ENST00000485367 ADAMTS9Q9P2N4 1935 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 SMIM23A6NLE4 172 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 KCNU1A8MYU2 1149 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 H0Y626 953 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 LINGO3P0C6S8 592 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 SLC2A3P11169 496 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 ACADMP11310 421 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 ABCB4P21439 1286 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 TNFAIP3P21580 790 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 CCR1P32246 355 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 COILP38432 576 aaPredicted RBP10.93□□□□□ -0.66
DDX56-212ENST00000485367 TPMTP51580 245 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 COPAP53621 1224 aa10.93□□□□□ -0.66
DDX56-212ENST00000485367 NME3Q13232 169 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms