RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 RYBPQ8N488 228 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-213ENST00000485080 TSEN2Q8NCE0 465 aaKnown RBP18.02■□□□□ 0.48
SREBF1-213ENST00000485080 SPOCK2Q92563 424 aa18.02■□□□□ 0.48
SREBF1-213ENST00000485080 BIRC7Q96CA5 298 aa18.02■□□□□ 0.48
SREBF1-213ENST00000485080 HDAC11Q96DB2 347 aa18.02■□□□□ 0.48
SREBF1-213ENST00000485080 ZNF641Q96N77 438 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-213ENST00000485080 ORAI3Q9BRQ5 295 aa18.02■□□□□ 0.48
SREBF1-213ENST00000485080 CINPQ9BW66 212 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-213ENST00000485080 MAK16Q9BXY0 300 aaKnown RBP18.02■□□□□ 0.48
SREBF1-213ENST00000485080 AMACRQ9UHK6 382 aa18.02■□□□□ 0.48
SREBF1-213ENST00000485080 CNOT1A5YKK6 2376 aaKnown RBP18.01■□□□□ 0.47
SREBF1-213ENST00000485080 TSPAN11A1L157 253 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 CCDC66A2RUB6 948 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 C16orf96A6NNT2 1141 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 PRR5-ARHGAP8B1AHC4 643 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 APOL1O14791 398 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 MATN3O15232 486 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 NRDCO43847 1150 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 SERPINF2P08697 491 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 CR2P20023 1033 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 NR2C2P49116 596 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 PEX5P50542 639 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 NAP1L1P55209 391 aaKnown RBP18.01■□□□□ 0.47
SREBF1-213ENST00000485080 COPS2P61201 443 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 ARHGAP8P85298 464 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 CCZ1BP86790 482 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 CCZ1P86791 482 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-213ENST00000485080 TFDP2Q14188 446 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 PPP2R5EQ16537 467 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 TFDP3Q5H9I0 405 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 SPOCD1Q6ZMY3 1216 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 SRLQ86TD4 932 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 NT5DC3Q86UY8 548 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 BBS5Q8N3I7 341 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 OR6K2Q8NGY2 324 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-213ENST00000485080 NSMCE1Q8WV22 266 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 KRT35Q92764 455 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 RNF25Q96BH1 459 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-213ENST00000485080 RBM41Q96IZ5 413 aaKnown RBP18.01■□□□□ 0.47
SREBF1-213ENST00000485080 OLFM3Q96PB7 478 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 MGME1Q9BQP7 344 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 BRD8Q9H0E9 1235 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 CAPN10Q9HC96 672 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 SLC6A14Q9UN76 642 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 EFR3BQ9Y2G0 817 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 DNAH14Q0VDD8 3507 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 DCHS1Q96JQ0 3298 aa18.01■□□□□ 0.47
SREBF1-213ENST00000485080 A0A1B0GTW7 788 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 A0A1W2PPC4 97 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 PLK4O00444 970 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 MUSKO15146 869 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 UGT2B4P06133 528 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 ADRB3P13945 408 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 GKP32189 559 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 PTPN7P35236 360 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 RGRP47804 291 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 MARCKSL1P49006 195 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 LIMK1P53667 647 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 AP1S1P61966 158 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 POM121L1PQ3SYA9 428 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 MARC1Q5VT66 337 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 ALG1LQ6GMV1 187 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 BZW1Q7L1Q6 419 aaKnown RBP18■□□□□ 0.47
SREBF1-213ENST00000485080 PARS2Q7L3T8 475 aaKnown RBP18■□□□□ 0.47
SREBF1-213ENST00000485080 KIAA2013Q8IYS2 634 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 RGL4Q8IZJ4 473 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 ZNF830Q96NB3 372 aaPredicted RBP18■□□□□ 0.47
SREBF1-213ENST00000485080 TRIM10Q9UDY6 481 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 EIF2B4Q9UI10 523 aaKnown RBP18■□□□□ 0.47
SREBF1-213ENST00000485080 CABIN1Q9Y6J0 2220 aa18■□□□□ 0.47
SREBF1-213ENST00000485080 SHROOM3Q8TF72 1996 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 hCG_1818297A0A087WSY0 165 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TBC1D3DA0A087WVF3 549 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TBC1D3IA0A087WXS9 549 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TBC1D3EA0A087X179 549 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TBC1D3KA0A087X1G2 549 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 A0A0U1RQJ8 604 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 MACROD2A1Z1Q3 448 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TBC1D3FA6NER0 549 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TBC1D3LB9A6J9 549 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 BCAT2O15382 392 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-213ENST00000485080 INSIG1O15503 277 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 KRT86O43790 486 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 FSBPO95073 299 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TBC1D3HP0C7X1 549 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TNNT1P13805 278 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 PPIDQ08752 370 aaKnown RBP17.99■□□□□ 0.47
SREBF1-213ENST00000485080 ZNF235Q14590 738 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 PDK1Q15118 436 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 SF3A2Q15428 464 aaKnown RBP17.99■□□□□ 0.47
SREBF1-213ENST00000485080 CCDC6Q16204 474 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TRIM61Q5EBN2 209 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TBC1D3GQ6DHY5 549 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TBC1D3CQ6IPX1 549 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 FBXL19Q6PCT2 694 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 BRAT1Q6PJG6 821 aa17.99■□□□□ 0.47
SREBF1-213ENST00000485080 TBC1D3Q8IZP1 549 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-213ENST00000485080 C12orf50Q8NA57 414 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-213ENST00000485080 ECHDC3Q96DC8 303 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms