RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 DNAJC28Q9NX36 388 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 SALL4Q9UJQ4 1053 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 GOLGA4Q13439 2230 aaKnown RBP11.63□□□□□ -0.55
SCFD1-206ENST00000484733 K7ESM1 405 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 TPP1O14773 563 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 HTR7P34969 479 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 SUOXP51687 545 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 ZNF143P52747 638 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-206ENST00000484733 RAD51Q06609 339 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 EFHC2Q5JST6 749 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 GDPD4Q6W3E5 623 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 LRRC69Q6ZNQ3 347 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 RYBPQ8N488 228 aaPredicted RBP11.63□□□□□ -0.55
SCFD1-206ENST00000484733 BTN2A2Q8WVV5 523 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 BAP1Q92560 729 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 CENPTQ96BT3 561 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 GDAP1L1Q96MZ0 367 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 KLHL32Q96NJ5 620 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 AGPAT1Q99943 283 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 CPEB1Q9BZB8 566 aaKnown RBP11.63□□□□□ -0.55
SCFD1-206ENST00000484733 TTYH3Q9C0H2 523 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 PRORYQ9H606 182 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 IPO11Q9UI26 975 aaKnown RBP11.63□□□□□ -0.55
SCFD1-206ENST00000484733 FZD10Q9ULW2 581 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 ANKRD11Q6UB99 2663 aaPredicted RBP11.62□□□□□ -0.55
SCFD1-206ENST00000484733 KRIT1O00522 736 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 FFAR2O15552 330 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 RRP8O43159 456 aaKnown RBP11.62□□□□□ -0.55
SCFD1-206ENST00000484733 BUB1O43683 1085 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 TMCC1O94876 653 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 GKP32189 559 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 YPEL5P62699 121 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 MYL5Q02045 173 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 PTK2BQ14289 1009 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 PARP15Q460N3 678 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 PPP1R2P3Q6NXS1 205 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 ZCCHC8Q6NZY4 707 aaKnown RBP11.62□□□□□ -0.55
SCFD1-206ENST00000484733 TMC6Q7Z403 805 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 UMODL1-AS1Q8N2C9 162 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 ZNF548Q8NEK5 533 aaPredicted RBP11.62□□□□□ -0.55
SCFD1-206ENST00000484733 FGF11Q92914 225 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 DEPDC7Q96QD5 511 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 CNPY3Q9BT09 278 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 CATSPERBQ9H7T0 1116 aa11.62□□□□□ -0.55
SCFD1-206ENST00000484733 URB1O60287 2271 aaKnown RBP11.62□□□□□ -0.55
SCFD1-206ENST00000484733 CCP110O43303 1012 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 BRINP1O60477 761 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 IGSF6O95976 241 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 UGT2B4P06133 528 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 CCDC172P0C7W6 258 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 SEMG2Q02383 582 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 EIF2B5Q13144 721 aaKnown RBP11.61□□□□□ -0.55
SCFD1-206ENST00000484733 SERINC3Q13530 473 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 TBC1D25Q3MII6 688 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 TMEM52BQ4KMG9 183 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 ACAD10Q6JQN1 1059 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 DNAJC24Q6P3W2 148 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 APTXQ7Z2E3 356 aaKnown RBP11.61□□□□□ -0.55
SCFD1-206ENST00000484733 GRAMD1AQ96CP6 724 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 DCBLD2Q96PD2 775 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 UBL7Q96S82 380 aaPredicted RBP11.61□□□□□ -0.55
SCFD1-206ENST00000484733 EPAS1Q99814 870 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 DONSONQ9NYP3 566 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 APC2O95996 2303 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 TSPAN11A1L157 253 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 ANKRD62A6NC57 917 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 RASA4BC9J798 803 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 NEMP1O14524 444 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 FGF10O15520 208 aaPredicted RBP11.61□□□□□ -0.55
SCFD1-206ENST00000484733 AQP9O43315 295 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 RASA4O43374 803 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 DXOO77932 396 aaKnown RBP11.61□□□□□ -0.55
SCFD1-206ENST00000484733 TIMP2P16035 220 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 FERP16591 822 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 EPHB2P29323 1055 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 UBXN1Q04323 297 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 PDE1CQ14123 709 aaPredicted RBP11.61□□□□□ -0.55
SCFD1-206ENST00000484733 ZNF542PQ5EBM4 170 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 ATXN7L2Q5T6C5 722 aaPredicted RBP11.61□□□□□ -0.55
SCFD1-206ENST00000484733 SASS6Q6UVJ0 657 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 LSMEM2Q8N112 164 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 PYROXD2Q8N2H3 581 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 OR6K2Q8NGY2 324 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 TPCN2Q8NHX9 752 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 VCPIP1Q96JH7 1222 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 PCMTD1Q96MG8 357 aaPredicted RBP11.61□□□□□ -0.55
SCFD1-206ENST00000484733 ZNF578Q96N58 590 aaPredicted RBP11.61□□□□□ -0.55
SCFD1-206ENST00000484733 C1QTNF7Q9BXJ2 289 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 SPASTQ9UBP0 616 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 KLF15Q9UIH9 416 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 GGT7Q9UJ14 662 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 MYO6Q9UM54 1294 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 TDRD6O60522 2096 aaKnown RBP11.61□□□□□ -0.55
SCFD1-206ENST00000484733 KNTC1P50748 2209 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 WDFY3Q8IZQ1 3526 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 ACACAQ13085 2346 aa11.61□□□□□ -0.55
SCFD1-206ENST00000484733 EIF3CLB5ME19 914 aaKnown RBP11.6□□□□□ -0.55
SCFD1-206ENST00000484733 JUNDP17535 347 aa11.6□□□□□ -0.55
SCFD1-206ENST00000484733 ITPKBP27987 946 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms