RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 HPDP32754 393 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 CD70P32970 193 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 HTR7P34969 479 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 GCGRP47871 477 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 HCAR3P49019 387 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 DGKEP52429 567 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 GDF10P55107 478 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 TBX4P57082 545 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 RPS24P62847 133 aaKnown RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 PPP2R2AP63151 447 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 COG7P83436 770 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 SKOR1P84550 965 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 PDIA2Q13087 525 aaKnown RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 KYNUQ16719 465 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 ZNF528Q3MIS6 628 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 RAP1GAP2Q684P5 730 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 NCBP2-AS2Q69YL0 99 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 MSANTD2Q6P1R3 559 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 KDM7AQ6ZMT4 941 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 ARHGEF18Q6ZSZ5 1173 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 RFX8Q6ZV50 586 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 TADA2BQ86TJ2 420 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 PRUNE1Q86TP1 453 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 KBTBD6Q86V97 674 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 RIBC1Q8N443 379 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 DEFB119Q8N690 84 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 GLIS1Q8NBF1 620 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 UHMK1Q8TAS1 419 aaKnown RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 CYB5D2Q8WUJ1 264 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 HMGB4Q8WW32 186 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 PRCCQ92733 491 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 PLD4Q96BZ4 506 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 OTUB2Q96DC9 234 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 RTP4Q96DX8 246 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 SERPINB11Q96P15 392 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 SERPINB12Q96P63 405 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 QKIQ96PU8 341 aaKnown RBP eCLIP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 CAPS2Q9BXY5 557 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 BRD8Q9H0E9 1235 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 TKTL2Q9H0I9 626 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 MTG2Q9H4K7 406 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 PARD6AQ9NPB6 346 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 RAB6BQ9NRW1 208 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 DONSONQ9NYP3 566 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 NINJ2Q9NZG7 142 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 MARK1Q9P0L2 795 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 SLC12A6Q9UHW9 1150 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 MMP17Q9ULZ9 603 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 NOVA2Q9UNW9 492 aaKnown RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 ATXN2Q99700 1313 aaKnown RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 C5orf60A6NFR6 353 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 SMIM23A6NLE4 172 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 ALOX15BO15296 676 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 TP73O15350 636 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 MTSS1O43312 755 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 ACSL4O60488 711 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 TBL1XO60907 577 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 CDH16O75309 829 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 GCATO75600 419 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 SPAG6O75602 509 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 SHBGP04278 402 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 HOXB2P14652 356 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 PRKCHP24723 683 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 HLA-FP30511 346 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 FDFT1P37268 417 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 GRIA2P42262 883 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 IL12RB1P42701 662 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 HARS2P49590 506 aaKnown RBP7.05□□□□□ -1.28
BRCA1-216ENST00000484087 CXCR3P49682 368 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 MAGOHP61326 146 aaKnown RBP7.05□□□□□ -1.28
BRCA1-216ENST00000484087 GBE1Q04446 702 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 SPEM2Q0P670 501 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 AP1B1Q10567 949 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 MTA1Q13330 715 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 SIM2Q14190 667 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-216ENST00000484087 NUMA1Q14980 2115 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 PAFAH1B3Q15102 231 aaKnown RBP7.05□□□□□ -1.28
BRCA1-216ENST00000484087 CRY1Q16526 586 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 DNAJC21Q5F1R6 531 aaKnown RBP7.05□□□□□ -1.28
BRCA1-216ENST00000484087 FSCBQ5H9T9 825 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 ZC3H14Q6PJT7 736 aaKnown RBP7.05□□□□□ -1.28
BRCA1-216ENST00000484087 ARMCX6Q7L4S7 300 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 SYT13Q7L8C5 426 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 LONP2Q86WA8 852 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 FAM217AQ8IXS0 508 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 PALM2Q8IXS6 379 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 ZBED8Q8IZ13 594 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 PYROXD2Q8N2H3 581 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 SH2D3CQ8N5H7 860 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 NAT8LQ8N9F0 302 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 ATP11CQ8NB49 1132 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 CCNYQ8ND76 341 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 TSTD1Q8NFU3 115 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 PYROXD1Q8WU10 500 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 HTR3CQ8WXA8 447 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 CPT1BQ92523 772 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 C9orf72Q96LT7 481 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 HAPLN3Q96S86 360 aa7.05□□□□□ -1.28
BRCA1-216ENST00000484087 CDK5RAP1Q96SZ6 601 aaKnown RBP7.05□□□□□ -1.28
BRCA1-216ENST00000484087 MAGEB5Q9BZ81 275 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms