RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SPATA31A3Q5VYP0 1347 aa4.63□□□□□ -1.67
PTCD3-214ENST00000483925 IGSF1Q8N6C5 1336 aa4.63□□□□□ -1.67
PTCD3-214ENST00000483925 ATAD2BQ9ULI0 1458 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 CYP3A7-CYP3A51PA0A087WV96 503 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 RNF103-CHMP3A0A140T963 221 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 RNF103O00237 685 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 LDLRAD4O15165 306 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 RTN2O75298 545 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 AVILO75366 819 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 RPS6KA4O75676 772 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 ALDOAP04075 364 aaKnown RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 TUBBP07437 444 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 IRF1P10914 325 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 SRCP12931 536 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 CYP4B1P13584 511 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 ARSAP15289 507 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 CYP3A7P24462 503 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 PTGS2P35354 604 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 MTHFRP42898 656 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 CCR10P46092 362 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 MTNR1AP48039 350 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 NT5C2P49902 561 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 CCR3P51677 355 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 CAPZA1P52907 286 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 FOXL2P58012 376 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 TAS2R50P59544 299 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 TUBB2AQ13885 445 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 BYSLQ13895 437 aaKnown RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 TOB2Q14106 344 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 RCN2Q14257 317 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 LASP1Q14847 261 aaKnown RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 SF3B3Q15393 1217 aaKnown RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 AASDHQ4L235 1098 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 SH2D4BQ5SQS7 431 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 KRT79Q5XKE5 535 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 KIAA0930Q6ICG6 404 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 GJB7Q6PEY0 223 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 TMEM88Q6PEY1 159 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 GLDNQ6ZMI3 551 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 RBPMS2Q6ZRY4 209 aaKnown RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 TADA2BQ86TJ2 420 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 ARHGEF25Q86VW2 580 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 P3H2Q8IVL5 708 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 IZUMO1Q8IYV9 350 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 HDDC3Q8N4P3 179 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 ENDOVQ8N8Q3 282 aaKnown RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 XXYLT1Q8NBI6 393 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 NSUN7Q8NE18 718 aaKnown RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 KCNJ9Q92806 393 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 HAS1Q92839 578 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 MR1Q95460 341 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 GTF3C6Q969F1 213 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 ZNF622Q969S3 477 aaKnown RBP eCLIP4.62□□□□□ -1.673e-8■■□□□ 11.8
PTCD3-214ENST00000483925 HDAC11Q96DB2 347 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 GPHA2Q96T91 129 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 FAM118BQ9BPY3 351 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 C17orf80Q9BSJ5 609 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 TUBB2BQ9BVA1 445 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 SMOC2Q9H3U7 446 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 MRPL44Q9H9J2 332 aaKnown RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 OGFRQ9NZT2 677 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 LRIT1Q9P2V4 623 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 MKLN1Q9UL63 735 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 SORCS3Q9UPU3 1222 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 TRIM17Q9Y577 477 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 COPG1Q9Y678 874 aaKnown RBP4.62□□□□□ -1.67
PTCD3-214ENST00000483925 CAPN7Q9Y6W3 813 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 XDHP47989 1333 aa4.62□□□□□ -1.67
PTCD3-214ENST00000483925 A0A1W2PQF6 199 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 OR6C76A6NM76 312 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 A8MVJ9 347 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 PSMD9O00233 223 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 PROM1O43490 865 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 LIASO43766 372 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 HBP1O60381 514 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 DIAPH2O60879 1101 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 TACC1O75410 805 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 ERN1O75460 977 aaKnown RBP4.61□□□□□ -1.67
PTCD3-214ENST00000483925 NDUFS3O75489 264 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 CAMTA2O94983 1202 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 SIX3O95343 332 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-214ENST00000483925 C22orf31O95567 290 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 GALTP07902 379 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 SUPT20HL2P0C7V6 817 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 RPS2P15880 293 aaKnown RBP4.61□□□□□ -1.67
PTCD3-214ENST00000483925 BMP5P22003 454 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 GCSHP23434 173 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 ADORA2AP29274 412 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 CASP3P42574 277 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 GABRB2P47870 512 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 RAB28P51157 221 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 GPC3P51654 580 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 TKTL1P51854 596 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 PNLIPRP2P54317 469 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 STARD6P59095 220 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 CEBPZQ03701 1054 aaKnown RBP4.61□□□□□ -1.67
PTCD3-214ENST00000483925 LRRC74AQ0VAA2 488 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 TEFQ10587 303 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 ITGA7Q13683 1181 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms