RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 CCDC13Q8IYE1 715 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 CAMKK1Q8N5S9 505 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 PCDH20Q8N6Y1 951 aaKnown RBP12.41□□□□□ -0.42
TRA2B-212ENST00000480461 KDF1Q8NAX2 398 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-212ENST00000480461 OR2T3Q8NH03 318 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 SLC35B2Q8TB61 432 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 HMGB4Q8WW32 186 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 C1orf54Q8WWF1 131 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 CASKIN2Q8WXE0 1202 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 TRIM44Q96DX7 344 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-212ENST00000480461 PBKQ96KB5 322 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 PSKH2Q96QS6 385 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 IL12RB2Q99665 862 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 CEP41Q9BYV8 373 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 ARRDC1-AS1Q9H2J1 176 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 RBM22Q9NW64 420 aaKnown RBP eCLIP12.41□□□□□ -0.426e-18■■□□□ 13
TRA2B-212ENST00000480461 HECAQ9UBI9 543 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-212ENST00000480461 EVLQ9UI08 416 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-212ENST00000480461 WASF2Q9Y6W5 498 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 LAMA1P25391 3075 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 PDE2AO00408 941 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 PLK4O00444 970 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 AXIN1O15169 862 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 CR2P20023 1033 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 RBL1P28749 1068 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 CHRNA3P32297 505 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 CCNHP51946 323 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 EIF3EP60228 445 aaKnown RBP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 MAXP61244 160 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 IFI35P80217 286 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 ZNF33AQ06730 810 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 NSUN2Q08J23 767 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 NIPAL4Q0D2K0 466 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 XRCC4Q13426 336 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 RFTN1Q14699 578 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 E2F5Q15329 346 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 SEL1L2Q5TEA6 688 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 TMCO4Q5TGY1 634 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 MARC1Q5VT66 337 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 ANO7Q6IWH7 933 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 PSAPL1Q6NUJ1 521 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 WDR5BQ86VZ2 330 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 CREG2Q8IUH2 290 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 PRELID2Q8N945 189 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 TSTD1Q8NFU3 115 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 OR2AP1Q8NGE2 309 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 ARRDC2Q8TBH0 407 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 TFB1MQ8WVM0 346 aaKnown RBP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 QKIQ96PU8 341 aaKnown RBP eCLIP12.4□□□□□ -0.422e-8■■□□□ 11.6
TRA2B-212ENST00000480461 NAPGQ99747 312 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 TMEM121BQ9BXQ6 578 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 POLMQ9NP87 494 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 NT5MQ9NPB1 228 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 SERGEFQ9UGK8 458 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 DNPEPQ9ULA0 475 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 TTC7AQ9ULT0 858 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-212ENST00000480461 INVSQ9Y283 1065 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 ATP8A1Q9Y2Q0 1164 aa12.4□□□□□ -0.42
TRA2B-212ENST00000480461 BCLAF3A2AJT9 711 aaKnown RBP12.39□□□□□ -0.43
TRA2B-212ENST00000480461 H7C0C1 242 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 LIASO43766 372 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 EPN2O95208 641 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 APBB3O95704 486 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 POP4O95707 220 aaKnown RBP12.39□□□□□ -0.43
TRA2B-212ENST00000480461 GSRP00390 522 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 HLA-DQB2P05538 268 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 MMP2P08253 660 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 RBP3P10745 1247 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 PTPN3P26045 913 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 SLC8A1P32418 973 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 CD68P34810 354 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-212ENST00000480461 MMP13P45452 471 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 ATP5OP48047 213 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 RENBPP51606 427 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 RHOAP61586 193 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 SNX1Q13596 522 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 ELAVL3Q14576 367 aaKnown RBP12.39□□□□□ -0.43
TRA2B-212ENST00000480461 STARD3Q14849 445 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 OASLQ15646 514 aaKnown RBP12.39□□□□□ -0.43
TRA2B-212ENST00000480461 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 POM121L1PQ3SYA9 428 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 SLC45A4Q5BKX6 768 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 CCDC181Q5TID7 509 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 BZW1Q7L1Q6 419 aaKnown RBP12.39□□□□□ -0.43
TRA2B-212ENST00000480461 SRLQ86TD4 932 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 CACUL1Q86Y37 369 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRA2B-212ENST00000480461 AADATQ8N5Z0 425 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 RLN3Q8WXF3 142 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 LOXL4Q96JB6 756 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 MGME1Q9BQP7 344 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 HEPHQ9BQS7 1158 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 TPSD1Q9BZJ3 242 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 BRD8Q9H0E9 1235 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 NOD2Q9HC29 1040 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 ITM2CQ9NQX7 267 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 SEPT3Q9UH03 358 aa12.39□□□□□ -0.43
TRA2B-212ENST00000480461 CTAGE9A4FU28 777 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 HACD1B0YJ81 288 aa12.38□□□□□ -0.43
TRA2B-212ENST00000480461 KRIT1O00522 736 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms