RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 GTPBP2Q9BX10 602 aaKnown RBP9.07□□□□□ -0.96
DDX56-211ENST00000479602 GPR174Q9BXC1 333 aa9.07□□□□□ -0.96
DDX56-211ENST00000479602 OSBPL8Q9BZF1 889 aa9.07□□□□□ -0.96
DDX56-211ENST00000479602 IL21RQ9HBE5 538 aa9.07□□□□□ -0.96
DDX56-211ENST00000479602 LZTFL1Q9NQ48 299 aa9.07□□□□□ -0.96
DDX56-211ENST00000479602 PRSS16Q9NQE7 514 aa9.07□□□□□ -0.96
DDX56-211ENST00000479602 DTLQ9NZJ0 730 aa9.07□□□□□ -0.96
DDX56-211ENST00000479602 MFHAS1Q9Y4C4 1052 aa9.07□□□□□ -0.96
DDX56-211ENST00000479602 ARID1BQ8NFD5 2236 aaPredicted RBP9.07□□□□□ -0.96
DDX56-211ENST00000479602 CEP192Q8TEP8 1941 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 RASA4BC9J798 803 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 ZBTB24O43167 697 aaPredicted RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 RASA4O43374 803 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 CREB3O43889 395 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 KALRNO60229 2985 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 NDUFS2O75306 463 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 TJP3O95049 919 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 PEX11BO96011 259 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 KRT1P04264 644 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 CD48P09326 243 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 FTH1P19P0C7X4 201 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 GNSP15586 552 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 CES1P23141 567 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 CCNCP24863 283 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 CD70P32970 193 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 ACSL1P33121 698 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 CSKP41240 450 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 GARSP41250 739 aaKnown RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 MARCKSL1P49006 195 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 SERPINH1P50454 418 aaKnown RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 ATXN3P54252 364 aaPredicted RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 IFI35P80217 286 aaPredicted RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 ECT2LQ008S8 904 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 ZBTB16Q05516 673 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 NSUN2Q08J23 767 aaKnown RBP eCLIP9.06□□□□□ -0.96
DDX56-211ENST00000479602 CAMK2BQ13554 666 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 GRM3Q14832 879 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 STARD3Q14849 445 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 PDK1Q15118 436 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 NOMO1Q15155 1222 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 HNRNPA1L2Q32P51 320 aaKnown RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 MBLAC2Q68D91 279 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 TIGD7Q6NT04 549 aaPredicted RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 MFSD7Q6UXD7 560 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 CPNE8Q86YQ8 564 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 NAXDQ8IW45 347 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 SH2D3CQ8N5H7 860 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 PCDH20Q8N6Y1 951 aaKnown RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 OR52K2Q8NGK3 314 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 ACTRT1Q8TDG2 376 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 HCAR2Q8TDS4 363 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 HSPH1Q92598 858 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 PRCCQ92733 491 aaPredicted RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 RTP4Q96DX8 246 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 ERLEC1Q96DZ1 483 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 PSKH2Q96QS6 385 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 NAP1L3Q99457 506 aaPredicted RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 VAT1Q99536 393 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 CALN1Q9BXU9 219 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 GOLPH3Q9H4A6 298 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 HOMER3Q9NSC5 361 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 NDFIP2Q9NV92 336 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 HAUS2Q9NVX0 235 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 GPATCH2LQ9NWQ4 482 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 MPP6Q9NZW5 540 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 DKK4Q9UBT3 224 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 VPS51Q9UID3 782 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 HPCAL4Q9UM19 191 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 SNX12Q9UMY4 172 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 SCML1Q9UN30 329 aa9.06□□□□□ -0.96
DDX56-211ENST00000479602 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.06□□□□□ -0.96
DDX56-211ENST00000479602 ADAMTS9Q9P2N4 1935 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 PLXNB3Q9ULL4 1909 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 CFAP69A5D8W1 941 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 APOL1O14791 398 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 PPP1R12AO14974 1030 aaPredicted RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 BCAT2O15382 392 aaPredicted RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 MAFKO60675 156 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 SRGAP2O75044 1071 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 FTCDO95954 541 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 CD160O95971 181 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 GSRP00390 522 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 EPHX1P07099 455 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 PYGMP11217 842 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 POLR2EP19388 210 aaKnown RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 NAP1L1P55209 391 aaKnown RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 RPS14P62263 151 aaKnown RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 ARF5P84085 180 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 TUBB2AQ13885 445 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 ELAVL3Q14576 367 aaKnown RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 PRKD1Q15139 912 aaPredicted RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 CYP1B1Q16678 543 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 KIF19Q2TAC6 998 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 HLA-BQ31612 363 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 ATP13A4Q4VNC1 1196 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 RWDD4Q6NW29 188 aaKnown RBP9.05□□□□□ -0.96
DDX56-211ENST00000479602 IL27RAQ6UWB1 636 aa9.05□□□□□ -0.96
DDX56-211ENST00000479602 KIAA1324Q6UXG2 1013 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms