RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 VPS45Q9NRW7 570 aa13.65□□□□□ -0.22
USP42-206ENST00000479544 TEKT2Q9UIF3 430 aa13.65□□□□□ -0.22
USP42-206ENST00000479544 PKP3Q9Y446 797 aa13.65□□□□□ -0.22
USP42-206ENST00000479544 C5P01031 1676 aa13.65□□□□□ -0.22
USP42-206ENST00000479544 CLDN5O00501 218 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 SH3BGRLO75368 114 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 AOC1P19801 751 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 BST2Q10589 180 aaKnown RBP13.64□□□□□ -0.23
USP42-206ENST00000479544 HORMAD1Q86X24 394 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 DENND6AQ8IWF6 608 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 TMEM130Q8N3G9 435 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 STN1Q9H668 368 aaKnown RBP13.64□□□□□ -0.23
USP42-206ENST00000479544 CNGB3Q9NQW8 809 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ARHGAP28Q9P2N2 729 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 SLC8A2Q9UPR5 921 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 PCDHB12Q9Y5F1 795 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 SNX8Q9Y5X2 465 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ASB14A6NK59 587 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 E7ENX8 843 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 HBP1O60381 514 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 CABYRO75952 493 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 SEC24AO95486 1093 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 CXCR3P49682 368 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 MAP3K10Q02779 954 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ZRANB3Q5FWF4 1079 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 KLHL35Q6PF15 583 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 KCTD8Q6ZWB6 473 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 PLD6Q8N2A8 252 aaKnown RBP13.64□□□□□ -0.23
USP42-206ENST00000479544 PTGR2Q8N8N7 351 aaPredicted RBP13.64□□□□□ -0.23
USP42-206ENST00000479544 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ACOX2Q99424 681 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 MARCH7Q9H992 704 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 RGS18Q9NS28 235 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 UBAP1Q9NZ09 502 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ASB3Q9Y575 518 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 CCDC154A6NI56 674 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 MTSS1O43312 755 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 GUCA1CO95843 209 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 IREB2P48200 963 aaKnown RBP13.64□□□□□ -0.23
USP42-206ENST00000479544 TPTEP56180 551 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 MAXP61244 160 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 SIAH1Q8IUQ4 282 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 FSTL5Q8N475 847 aaPredicted RBP13.64□□□□□ -0.23
USP42-206ENST00000479544 CLEC4CQ8WTT0 213 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 PPM1MQ96MI6 270 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 OSMRQ99650 979 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ADI1Q9BV57 179 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ZMYM5Q9UJ78 669 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 KIAA1257Q9ULG3 409 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 A0A0J9YVX5 310 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 C19orf81C9J6K1 198 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 USP17L7P0C7H9 530 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 CYP2C8P10632 490 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ZNF182P17025 639 aaPredicted RBP13.64□□□□□ -0.23
USP42-206ENST00000479544 GCAP28676 217 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 FAM98BQ52LJ0 330 aaKnown RBP13.64□□□□□ -0.23
USP42-206ENST00000479544 DEPDC1Q5TB30 811 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ARHGAP17Q68EM7 881 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 CCDC80Q76M96 950 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 OTOP3Q7RTS5 596 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 PIGZQ86VD9 579 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 TMEM192Q8IY95 271 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ADGRF2Q8IZF7 708 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 ANKLE1Q8NAG6 615 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 SPATA22Q8NHS9 363 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.64□□□□□ -0.23
USP42-206ENST00000479544 OTULINQ96BN8 352 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 DHX33Q9H6R0 707 aaKnown RBP13.64□□□□□ -0.23
USP42-206ENST00000479544 ERAP1Q9NZ08 941 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 TELO2Q9Y4R8 837 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 TIMM22Q9Y584 194 aa13.64□□□□□ -0.23
USP42-206ENST00000479544 DYNC1LI2O43237 492 aaPredicted RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 ZNF286BP0CG31 522 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 ATP5F1P24539 256 aaPredicted RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 CYP4F2P78329 520 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 CYP4F3Q08477 520 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 SLCO6A1Q86UG4 719 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 ZNF410Q86VK4 478 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 CENPLQ8N0S6 344 aaPredicted RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 C8orf59Q8N0T1 100 aaPredicted RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 ZNF276Q8N554 614 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 C12orf43Q96C57 262 aaKnown RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 CCDC126Q96EE4 140 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 ACO2Q99798 780 aaKnown RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 ALG2Q9H553 416 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 KCNK13Q9HB14 408 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 FBXO5Q9UKT4 447 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 EFR3BQ9Y2G0 817 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 AAR2Q9Y312 384 aaKnown RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 CAB39Q9Y376 341 aaPredicted RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 LAMA4Q16363 1823 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 EI24O14681 340 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 MTHFD1P11586 935 aaKnown RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 UBA1P22314 1058 aaKnown RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 NPY2RP49146 381 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 BROXQ5VW32 411 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 CRTC3Q6UUV7 619 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 NIPA1Q7RTP0 329 aa13.63□□□□□ -0.23
USP42-206ENST00000479544 PIWIL4Q7Z3Z4 852 aaKnown RBP13.63□□□□□ -0.23
USP42-206ENST00000479544 CCDC185Q8N715 623 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms