RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 NPY6RQ99463 290 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 CNPY3Q9BT09 278 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 WDCPQ9H6R7 721 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 GP6Q9HCN6 339 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 BATF3Q9NR55 127 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 ARHGEF4Q9NR80 690 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 ETAA1Q9NY74 926 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 WHRNQ9P202 907 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 DNAI1Q9UI46 699 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 ADAM21Q9UKJ8 722 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 FBXL21Q9UKT6 434 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 SORCS3Q9UPU3 1222 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 A0A0A6YYK5 440 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-209ENST00000479532 TCRBV5S1A1TA0A578 114 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 TMEM191CA6NGB0 347 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 CHUKO15111 745 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 ZSCAN12O43309 604 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 MSI1O43347 362 aaKnown RBP6.36□□□□□ -1.39
SF3B1-209ENST00000479532 KRT86O43790 486 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 PRPSAP2O60256 369 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 PPM1BO75688 479 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 ASMTLO95671 621 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 MOCS2O96007 188 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-209ENST00000479532 IGLV3-25P01717 112 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 FYNP06241 537 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 ITGAVP06756 1048 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 ASGR2P07307 311 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 CCDC175P0C221 793 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 SRFP11831 508 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 OAS2P29728 719 aaKnown RBP6.36□□□□□ -1.39
SF3B1-209ENST00000479532 ARHGAP25P42331 645 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 VAV2P52735 878 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 FCHO2Q0JRZ9 810 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 RBBP5Q15291 538 aaKnown RBP6.36□□□□□ -1.39
SF3B1-209ENST00000479532 LONRF2Q1L5Z9 754 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 CCDC14Q49A88 953 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 ODF2Q5BJF6 829 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 RABGAP1LQ5R372 815 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 FOXB2Q5VYV0 432 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 SCYL2Q6P3W7 929 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 C1orf228Q6PIY5 440 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 LRRC31Q6UY01 552 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 RAD9BQ6WBX8 426 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 KIAA0907Q7Z7F0 614 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-209ENST00000479532 DNAAF5Q86Y56 855 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 TMEM139Q8IV31 216 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 DENND1CQ8IV53 801 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 SLC44A3Q8N4M1 653 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 ZNF557Q8N988 423 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-209ENST00000479532 ACRBPQ8NEB7 543 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 OLIG1Q8TAK6 271 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 SLC35G2Q8TBE7 412 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 NT5C3BQ969T7 300 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 AZIN2Q96A70 460 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 MSANTD3Q96H12 275 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 TBCBQ99426 244 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 PACSIN1Q9BY11 444 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 ARFGAP3Q9NP61 516 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 GKN1Q9NS71 199 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 RAPGEFL1Q9UHV5 662 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 NENFQ9UMX5 172 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 DUSP12Q9UNI6 340 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 CCL26Q9Y258 94 aa6.36□□□□□ -1.39
SF3B1-209ENST00000479532 KIF26AQ9ULI4 1882 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-209ENST00000479532 TICRRQ7Z2Z1 1910 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 TRAV20A0A0B4J274 112 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 TMEM110-MUSTN1A8MSY1 372 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 BTNL10A8MVZ5 291 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 KCNU1A8MYU2 1149 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 F5H5T6 163 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 ACSL4O60488 711 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 ENDOD1O94919 500 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 IGLV3-27P01718 113 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 ALADP13716 330 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 GLULP15104 373 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 MAN1A1P33908 653 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SLC1A1P43005 524 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 CXCR3P49682 368 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 RPL7AP62424 266 aaKnown RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 PPP2R2AP63151 447 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 GAD2Q05329 585 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 RUNX3Q13761 415 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 MESDQ14696 234 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 TCEA2Q15560 299 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 C15orf59Q2T9L4 293 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 ITPRIPL2Q3MIP1 535 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 MPPE1Q53F39 396 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 ZFYVE27Q5T4F4 411 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SFRP5Q5T4F7 317 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 ADGRF1Q5T601 910 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 WLSQ5T9L3 541 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 RNF187Q5TA31 235 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 ZNF574Q6ZN55 896 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 YTHDF3Q7Z739 585 aaKnown RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SLFN11Q7Z7L1 901 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SDCCAG8Q86SQ7 713 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 CHSY1Q86X52 802 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 FAM131BQ86XD5 332 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 BBS7Q8IWZ6 715 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SYCE1Q8N0S2 351 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms