RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 LRGUKQ96M69 825 aa24.9■■□□□ 1.58
SYNGAP1-206ENST00000479510 SHROOM3Q8TF72 1996 aa24.9■■□□□ 1.58
SYNGAP1-206ENST00000479510 EME2A4GXA9 379 aaPredicted RBP24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 AVPR1AP37288 418 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 MPP1Q00013 466 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 PSMD5Q16401 504 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 UPP1Q16831 310 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 TSTD2Q5T7W7 516 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 RASIP1Q5U651 963 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 AFMIDQ63HM1 303 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 ESRP1Q6NXG1 681 aaKnown RBP24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 CTU1Q7Z7A3 348 aaKnown RBP24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 DENND6AQ8IWF6 608 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 CATSPER2Q96P56 530 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 RTP3Q9BQQ7 232 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 TBC1D13Q9NVG8 400 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 DSEQ9UL01 958 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 TRPV2Q9Y5S1 764 aa24.89■■□□□ 1.58
SYNGAP1-206ENST00000479510 SMIM31A0A1B0GVY4 71 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 CHRM1P11229 460 aaPredicted RBP24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 CCR10P46092 362 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 PSMD8P48556 350 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 HSPA13P48723 471 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 POLE2P56282 527 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 CTBP1Q13363 440 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 PPP2R5DQ14738 602 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 RBBP5Q15291 538 aaKnown RBP24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 MAPRE1Q15691 268 aaKnown RBP24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 TIGD5Q53EQ6 642 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 NXNQ6DKJ4 435 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 RANBP10Q6VN20 620 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 MFSD6LQ8IWD5 586 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 CALML6Q8TD86 181 aa24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 COPG1Q9Y678 874 aaKnown RBP24.89■■□□□ 1.57
SYNGAP1-206ENST00000479510 ARL5CA6NH57 179 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 MEIS3P2A8K0S8 358 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 MT-CYBP00156 380 aaPredicted RBP24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 XRCC1P18887 633 aaPredicted RBP24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 SLC1A2P43004 574 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 SLC12A2P55011 1212 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 NRG1Q02297 640 aaPredicted RBP24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 MAPRE2Q15555 327 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 ARHGAP36Q6ZRI8 547 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 GALNT7Q86SF2 657 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 DCUN1D1Q96GG9 259 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 ELMO2Q96JJ3 720 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 ABCC13Q9NSE7 274 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 CACNG4Q9UBN1 327 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 FBXO5Q9UKT4 447 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 ST3GAL5Q9UNP4 418 aa24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 TRIP12Q14669 1992 aaPredicted RBP24.88■■□□□ 1.57
SYNGAP1-206ENST00000479510 SDHDO14521 159 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 CCR1P32246 355 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 ILF2Q12905 390 aaKnown RBP24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 DYNC1I2Q13409 638 aaKnown RBP24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 CEACAM7Q14002 265 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 CNPY1Q3B7I2 92 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 CHSY3Q70JA7 882 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 TICAM1Q8IUC6 712 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 PELI3Q8N2H9 469 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 CCNYL1Q8N7R7 359 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 PKMYT1Q99640 499 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 SLC39A8Q9C0K1 460 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 SMOC2Q9H3U7 446 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 ARNT2Q9HBZ2 717 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 EML4Q9HC35 981 aaKnown RBP24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 MIOSQ9NXC5 875 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 RIMS3Q9UJD0 308 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 NUP205Q92621 2012 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 BDNFP23560 247 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 GSTT1P30711 240 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 TAS2R39P59534 338 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 GALNT1Q10472 559 aaPredicted RBP24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 FAM83EQ2M2I3 478 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 NEPROQ6NW34 567 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 TRIM67Q6ZTA4 783 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 MRPL10Q7Z7H8 261 aaKnown RBP24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 FATE1Q969F0 183 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 TOP1MTQ969P6 601 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 LENG1Q96BZ8 264 aaPredicted RBP24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 RANBP9Q96S59 729 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 FSD1LQ9BXM9 530 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 COMMD3-BMI1R4GMX3 469 aa24.87■■□□□ 1.57
SYNGAP1-206ENST00000479510 TCAF2A6NFQ2 919 aa24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 PAGE1O75459 146 aa24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 CLCN5P51795 746 aa24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 FKBP1BP68106 108 aa24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 ZNF470Q6ECI4 717 aa24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 TXNDC5Q8NBS9 432 aaKnown RBP24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 HEXDCQ8WVB3 486 aa24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 TSPAN17Q96FV3 270 aa24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 FTHL17Q9BXU8 183 aa24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 RHOBTB2Q9BYZ6 727 aa24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 SIK2Q9H0K1 926 aa24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 RBM22Q9NW64 420 aaKnown RBP eCLIP24.86■■□□□ 1.57
SYNGAP1-206ENST00000479510 PRSS51A0A1B0GVH4 220 aa24.85■■□□□ 1.57
SYNGAP1-206ENST00000479510 CCDC78A2IDD5 438 aa24.85■■□□□ 1.57
SYNGAP1-206ENST00000479510 CPB1P15086 417 aa24.85■■□□□ 1.57
SYNGAP1-206ENST00000479510 PURAQ00577 322 aaKnown RBP24.85■■□□□ 1.57
SYNGAP1-206ENST00000479510 SLC14A2Q15849 920 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms