RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 EIF4A3P38919 411 aaKnown RBP17.45■□□□□ 0.38
VIM-204ENST00000478746 ABL2P42684 1182 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 TLE1Q04724 770 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 C1QBPQ07021 282 aaKnown RBP17.45■□□□□ 0.38
VIM-204ENST00000478746 ELOCQ15369 112 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 LVRNQ6Q4G3 990 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 FAM183BPQ6ZVS7 135 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 VPS36Q86VN1 386 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 SDR16C5Q8N3Y7 309 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 ARL10Q8N8L6 244 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 C1orf74Q96LT6 269 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
VIM-204ENST00000478746 INTS2Q9H0H0 1204 aaKnown RBP17.45■□□□□ 0.38
VIM-204ENST00000478746 SLC25A18Q9H1K4 315 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 ATP13A1Q9HD20 1204 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 ANLNQ9NQW6 1124 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 RRN3Q9NYV6 651 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 GGT7Q9UJ14 662 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 ITM2BQ9Y287 266 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 FCF1Q9Y324 198 aaKnown RBP17.45■□□□□ 0.38
VIM-204ENST00000478746 PCDHB11Q9Y5F2 797 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 PCDHGA4Q9Y5G9 962 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 UNC13CQ8NB66 2214 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 A0A1W2PQM1 296 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 PSMA7O14818 248 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 DAB1O75553 588 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 SMC2O95347 1197 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 RPLP0P05388 317 aaKnown RBP17.44■□□□□ 0.38
VIM-204ENST00000478746 CELA2BP08218 269 aaPredicted RBP17.44■□□□□ 0.38
VIM-204ENST00000478746 ALPIP09923 528 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 CTSEP14091 401 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 CCKBRP32239 447 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 CXCR3P49682 368 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 BLKP51451 505 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 SNX16P57768 344 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 SLC6A3Q01959 620 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 STIM1Q13586 685 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 UBAP2LQ14157 1087 aaKnown RBP17.44■□□□□ 0.38
VIM-204ENST00000478746 ZNF805Q5CZA5 627 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 OLFML1Q6UWY5 402 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 ZNF783Q6ZMS7 281 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 MACC1Q6ZN28 852 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 VASH2Q86V25 355 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 FSTL5Q8N475 847 aaPredicted RBP17.44■□□□□ 0.38
VIM-204ENST00000478746 RYBPQ8N488 228 aaPredicted RBP17.44■□□□□ 0.38
VIM-204ENST00000478746 ARHGEF26Q96DR7 871 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 DHTKD1Q96HY7 919 aaPredicted RBP17.44■□□□□ 0.38
VIM-204ENST00000478746 CPEB1Q9BZB8 566 aaKnown RBP17.44■□□□□ 0.38
VIM-204ENST00000478746 LRRN3Q9H3W5 708 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 GEMIN8Q9NWZ8 242 aaKnown RBP17.44■□□□□ 0.38
VIM-204ENST00000478746 LOXL2Q9Y4K0 774 aa17.44■□□□□ 0.38
VIM-204ENST00000478746 I6L893 689 aaPredicted RBP17.43■□□□□ 0.38
VIM-204ENST00000478746 TOR1BO14657 336 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 SRGAP2O75044 1071 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 F9P00740 461 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 GKP32189 559 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 IGFALSP35858 605 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 USP8P40818 1118 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 CYP4F2P78329 520 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 ACBD5Q5T8D3 534 aaPredicted RBP17.43■□□□□ 0.38
VIM-204ENST00000478746 ENOSF1Q7L5Y1 443 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 SLC26A9Q7LBE3 791 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 ZFAND4Q86XD8 727 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 PASD1Q8IV76 773 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 PLPP6Q8IY26 295 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 KYQ8NBH2 561 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 OR6C4Q8NGE1 309 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 SMARCE1Q969G3 411 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 NPY6RQ99463 290 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 C1QTNF7Q9BXJ2 289 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 TM6SF2Q9BZW4 377 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 GPR34Q9UPC5 381 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 PAXBP1Q9Y5B6 917 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 ACTL7AQ9Y615 435 aa17.43■□□□□ 0.38
VIM-204ENST00000478746 BSNQ9UPA5 3926 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 IGLV3-10A0A075B6K4 115 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 PRAMEF33A0A0G2JMD5 474 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 AGRPO00253 132 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 PRAMEF10O60809 474 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 MMP20O60882 483 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 TM7SF2O76062 418 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 ERBB2P04626 1255 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 TFE3P19532 575 aaPredicted RBP17.42■□□□□ 0.38
VIM-204ENST00000478746 ITIH1P19827 911 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 HK3P52790 923 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 RNASE9P60153 205 aaKnown RBP17.42■□□□□ 0.38
VIM-204ENST00000478746 ARF5P84085 180 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 DEUP1Q05D60 604 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 OTUD1Q5VV17 481 aaPredicted RBP17.42■□□□□ 0.38
VIM-204ENST00000478746 TTC7BQ86TV6 843 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 GKN2Q86XP6 184 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 HID1Q8IV36 788 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 ZNF397Q8NF99 534 aaPredicted RBP17.42■□□□□ 0.38
VIM-204ENST00000478746 OR6K2Q8NGY2 324 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 PCDH19Q8TAB3 1148 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 ISG20Q96AZ6 181 aaKnown RBP17.42■□□□□ 0.38
VIM-204ENST00000478746 TMEM159Q96B96 161 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 EDEM3Q9BZQ6 932 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 SYNCQ9H7C4 482 aa17.42■□□□□ 0.38
VIM-204ENST00000478746 MBNL1Q9NR56 388 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms