RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 B4GALNT4Q76KP1 1039 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 PARS2Q7L3T8 475 aaKnown RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 NT5DC3Q86UY8 548 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 VSIG1Q86XK7 387 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 KIAA2013Q8IYS2 634 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TBC1D3Q8IZP1 549 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 UBL4BQ8N7F7 174 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 EXD1Q8NHP7 514 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TCEAL3Q969E4 200 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 KLHL32Q96NJ5 620 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 LGMNQ99538 433 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 HEMGNQ9BXL5 484 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 KCNF1Q9H3M0 494 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SGK2Q9HBY8 427 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SEPT10Q9P0V9 454 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SAE1Q9UBE0 346 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SEPT3Q9UH03 358 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 FZD4Q9ULV1 537 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 PPP2R2CQ9Y2T4 447 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 CNOT1A5YKK6 2376 aaKnown RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SPTBN2O15020 2390 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 hCG_1818297A0A087WSY0 165 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 BCLAF3A2AJT9 711 aaKnown RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 CCDC66A2RUB6 948 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 PATE3B3GLJ2 98 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 MUSKO15146 869 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 POP4O95707 220 aaKnown RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 CFIP05156 583 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ADRB3P13945 408 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 PECAM1P16284 738 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ZFXP17010 805 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 MX2P20592 715 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ITGB7P26010 798 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 MAT2AP31153 395 aaKnown RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 MMP13P45452 471 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 RWDD2BP57060 319 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 PPP2CBP62714 309 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 PPP2CAP67775 309 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ADCY2Q08462 1091 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ITKQ08881 620 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ZNF211Q13398 564 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TFDP2Q14188 446 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 RFTN1Q14699 578 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SF3A2Q15428 464 aaKnown RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 WDR45BQ5MNZ6 344 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 FAM182AQ5T1J6 154 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 SYCP2LQ5T4T6 812 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 CFAP58Q5T655 872 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 PIP5KL1Q5T9C9 394 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 MARC1Q5VT66 337 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TIGD7Q6NT04 549 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 AADACL2Q6P093 401 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 FBXL19Q6PCT2 694 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 GDPD4Q6W3E5 623 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ERN2Q76MJ5 926 aaKnown RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 RCOR2Q8IZ40 523 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 BBS5Q8N3I7 341 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ZCCHC9Q8N567 271 aaKnown RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 RNF10Q8N5U6 811 aaKnown RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 OR2T34Q8NGX1 318 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ALG3Q92685 438 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 FOXJ1Q92949 421 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ZNF419Q96HQ0 510 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 LOXL4Q96JB6 756 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ZNF599Q96NL3 588 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 ALS2CR12Q96Q35 445 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 CEP41Q9BYV8 373 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 NT5MQ9NPB1 228 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 PARD6AQ9NPB6 346 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 TMEM74BQ9NUR3 256 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 EIF2B4Q9UI10 523 aaKnown RBP6.99□□□□□ -1.29
BRCA1-215ENST00000478531 PCDHA3Q9Y5H8 950 aa6.99□□□□□ -1.29
BRCA1-215ENST00000478531 C16orf96A6NNT2 1141 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 HAX1O00165 279 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 KCNK1O00180 336 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 NEMP1O14524 444 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 PPP1R12AO14974 1030 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-215ENST00000478531 PLRG1O43660 514 aaKnown RBP6.98□□□□□ -1.29
BRCA1-215ENST00000478531 PCDH8O95206 1070 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 PEX11BO96011 259 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 C7P10643 843 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 CTNNA2P26232 953 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 SERPINA4P29622 427 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 RENBPP51606 427 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 NEK3P51956 506 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 PDK1Q15118 436 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 ZNF805Q5CZA5 627 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 SPDYCQ5MJ68 293 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 SRLQ86TD4 932 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 ZC3H18Q86VM9 953 aaKnown RBP6.98□□□□□ -1.29
BRCA1-215ENST00000478531 CAMK1DQ8IU85 385 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 LRRC49Q8IUZ0 686 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 SYT12Q8IV01 421 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 PLPP6Q8IY26 295 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 CCDC13Q8IYE1 715 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 PGBD5Q8N414 524 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 CADM4Q8NFZ8 388 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 PDCD6IPQ8WUM4 868 aaKnown RBP6.98□□□□□ -1.29
BRCA1-215ENST00000478531 BIRC7Q96CA5 298 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 HDAC11Q96DB2 347 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms