RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ARHGAP24Q8N264 748 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 C7orf31Q8N865 590 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 ENDOVQ8N8Q3 282 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 FAM13CQ8NE31 585 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 APPL2Q8NEU8 664 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 DEPDC1BQ8WUY9 529 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 NSMCE1Q8WV22 266 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 KBTBD7Q8WVZ9 684 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 HTR3CQ8WXA8 447 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 KCTD13Q8WZ19 329 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CDKL2Q92772 493 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 N4BP2L2Q92802 583 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PTPRN2Q92932 1015 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 NKD1Q969G9 470 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 ISL2Q96A47 359 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 E2F7Q96AV8 911 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 C18orf25Q96B23 403 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PTCD3Q96EY7 689 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PAWRQ96IZ0 340 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 MAML3Q96JK9 1138 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 OLFM3Q96PB7 478 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 HNRNPABQ99729 332 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SIKE1Q9BRV8 207 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 BTBD10Q9BSF8 475 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 EIF2AQ9BY44 585 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 B3GNT5Q9BYG0 378 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 WWP1Q9H0M0 922 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 FAM49AQ9H0Q0 323 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 MMADHCQ9H3L0 296 aaPredicted RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 DPEP3Q9H4B8 488 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 FAM96AQ9H5X1 160 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 CARS2Q9HA77 564 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 PLAC1Q9HBJ0 212 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 BATF3Q9NR55 127 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SMYD2Q9NRG4 433 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 KRT82Q9NSB4 513 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SETD4Q9NVD3 440 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 GEMIN8Q9NWZ8 242 aaKnown RBP5.05□□□□□ -1.6
SF3B6-202ENST00000478050 MOCS1Q9NZB8 636 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 DTLQ9NZJ0 730 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 SIRPGQ9P1W8 387 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 HEY2Q9UBP5 337 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 FZD10Q9ULW2 581 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 STAP1Q9ULZ2 295 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 L3MBTL1Q9Y468 752 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 MAD1L1Q9Y6D9 718 aa5.05□□□□□ -1.6
SF3B6-202ENST00000478050 MYO9BQ13459 2157 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 MYLKQ15746 1914 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SMIM28A0A1B0GU29 152 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 MBLAC1A4D2B0 266 aaPredicted RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SDR42E2A6NKP2 422 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 BTBD19C9JJ37 291 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 FCHO1O14526 889 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 GYG2O15488 501 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 MFSD11O43934 449 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 DIAPH2O60879 1101 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SNNO75324 88 aaPredicted RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 PIAS1O75925 651 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 FBXO21O94952 628 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 LUC7L3O95232 432 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CBX6O95503 412 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 BPGMP07738 259 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 GSTP1P09211 210 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 PDGFRBP09619 1106 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 DLDP09622 509 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 MYL2P10916 166 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 VAV1P15498 845 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 GOT1P17174 413 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 PGAM1P18669 254 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 TFE3P19532 575 aaPredicted RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 EPHB2P29323 1055 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SERPINB3P29508 390 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 LRPAP1P30533 357 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 GDNFP39905 211 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 GARSP41250 739 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SOX9P48436 509 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CLCN7P51798 805 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CLNS1AP54105 237 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 TMPRSS15P98073 1019 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 OCRLQ01968 901 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 NIPAL4Q0D2K0 466 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 BST1Q10588 318 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 WASHC5Q12768 1159 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 STX3Q13277 289 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SERINC3Q13530 473 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CAMK2GQ13555 558 aaPredicted RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 CRYMQ14894 314 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 ZRSR2Q15696 482 aaKnown RBP5.04□□□□□ -1.6
SF3B6-202ENST00000478050 INSCQ1MX18 579 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 FAM110CQ1W6H9 321 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 ACCSLQ4AC99 568 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 TEX44Q53QW1 395 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 GLRA4Q5JXX5 417 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SPANXN3Q5MJ09 141 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 ANKRD20A2Q5SQ80 823 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 SYCP2LQ5T4T6 812 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 ANKRD20A1Q5TYW2 823 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 EGFLAMQ63HQ2 1017 aa5.04□□□□□ -1.6
SF3B6-202ENST00000478050 DBX2Q6ZNG2 339 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms