RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 UBE2J1Q9Y385 318 aaPredicted RBP5.14□□□□□ -1.59
VPS50-214ENST00000477935 ROBO3Q96MS0 1386 aa5.14□□□□□ -1.59
VPS50-214ENST00000477935 EP300Q09472 2414 aaPredicted RBP5.14□□□□□ -1.59
VPS50-214ENST00000477935 FAM208BQ5VWN6 2430 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 CCDC194A0A1B0GVG4 234 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 GXYLT2A0PJZ3 443 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 PPEF2O14830 753 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 PIP5K1BO14986 540 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 DUSP11O75319 330 aaKnown RBP5.13□□□□□ -1.59
VPS50-214ENST00000477935 CNMDO75829 334 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 CABYRO75952 493 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 PLAUP00749 431 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 ANXA6P08133 673 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 NPPBP16860 134 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 CST5P28325 142 aaPredicted RBP5.13□□□□□ -1.59
VPS50-214ENST00000477935 SERPINB3P29508 390 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 SLC8A1P32418 973 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 PTGER1P34995 402 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 TECP42680 631 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 RPS13P62277 151 aaKnown RBP5.13□□□□□ -1.59
VPS50-214ENST00000477935 HSF1Q00613 529 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 CALD1Q05682 793 aaKnown RBP5.13□□□□□ -1.59
VPS50-214ENST00000477935 RABEP1Q15276 862 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 SKAP1Q86WV1 359 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 FOXP4Q8IVH2 680 aaPredicted RBP5.13□□□□□ -1.59
VPS50-214ENST00000477935 HERC6Q8IVU3 1022 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 ADSSL1Q8N142 457 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 PIGOQ8TEQ8 1089 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 SLC22A17Q8WUG5 538 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 PMM1Q92871 262 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 COQ8BQ96D53 544 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 PABPC5Q96DU9 382 aaKnown RBP5.13□□□□□ -1.59
VPS50-214ENST00000477935 SLC39A13Q96H72 371 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 ZNF845Q96IR2 970 aaPredicted RBP5.13□□□□□ -1.59
VPS50-214ENST00000477935 SENP7Q9BQF6 1050 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 ELOVL1Q9BW60 279 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 GATA5Q9BWX5 397 aaPredicted RBP5.13□□□□□ -1.59
VPS50-214ENST00000477935 SIL1Q9H173 461 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 FBXO28Q9NVF7 368 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 ELOVL5Q9NYP7 299 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 MUTYHQ9UIF7 546 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 CNPY2Q9Y2B0 182 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 SALL1Q9NSC2 1324 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 GPR179Q6PRD1 2367 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 AK9Q5TCS8 1911 aa5.13□□□□□ -1.59
VPS50-214ENST00000477935 TECTAO75443 2155 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 ASGR1P07306 291 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 RFC2P35250 354 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 STAT6P42226 847 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 AGTR2P50052 363 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 ZNF84P51523 738 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 ALDH18A1P54886 795 aaKnown RBP5.12□□□□□ -1.59
VPS50-214ENST00000477935 ID2Q02363 134 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 CBFBQ13951 182 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 COG2Q14746 738 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 SHC4Q6S5L8 630 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 DEF8Q6ZN54 512 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 RBM44Q6ZP01 1051 aaKnown RBP5.12□□□□□ -1.59
VPS50-214ENST00000477935 ASB12Q8WXK4 309 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 NPIPB3Q92617 1050 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 PIGKQ92643 395 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 RMDN1Q96DB5 314 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 MCRS1Q96EZ8 462 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 PRPF18Q99633 342 aaKnown RBP5.12□□□□□ -1.59
VPS50-214ENST00000477935 KCNK9Q9NPC2 374 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 MTMR4Q9NYA4 1195 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 PCDHB7Q9Y5E2 793 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 PTPRFP10586 1907 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 ZNF292O60281 2723 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 WDR87Q6ZQQ6 2873 aa5.12□□□□□ -1.59
VPS50-214ENST00000477935 FLNBO75369 2602 aaKnown RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 GPR75-ASB3A0A0A6YYF3 556 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 SLC22A23A1A5C7 686 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 C2CD4BA6NLJ0 364 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 AQP12BA6NM10 295 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 H3BQ06 376 aaPredicted RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 ASNA1O43681 348 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 BAIAP3O94812 1187 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 CER1O95813 267 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 SUPT20HL2P0C7V6 817 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 ZNF853P0CG23 659 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 SETSIPP0DME0 302 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 CTSAP10619 480 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 ST6GAL1P15907 406 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 RPS6KB1P23443 525 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 HTR3AP46098 478 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 CCL23P55773 120 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 SIGLEC14Q08ET2 396 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 DMWDQ09019 674 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 MTA1Q13330 715 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 HDAC1Q13547 482 aaPredicted RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 STIM1Q13586 685 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 PUM3Q15397 648 aaKnown RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 TRIM71Q2Q1W2 868 aaKnown RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 EARS2Q5JPH6 523 aaKnown RBP5.11□□□□□ -1.59
VPS50-214ENST00000477935 PXDC1Q5TGL8 231 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 TOGARAM2Q6ZUX3 1019 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 RFX6Q8HWS3 928 aa5.11□□□□□ -1.59
VPS50-214ENST00000477935 LAS2Q8IYD9 372 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms