RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 UGT2B4P06133 528 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 SKILP12757 684 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 CKMT2P17540 419 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 DGKAP23743 735 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 ACADVLP49748 655 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 NDST2P52849 883 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 RAD51Q06609 339 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 KLHL30Q0D2K2 578 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 SGCGQ13326 291 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 CA9Q16790 459 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 PROX2Q3B8N5 592 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 CCDC157Q569K6 752 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 TTC7BQ86TV6 843 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 TMPRSS12Q86WS5 348 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 PROSER1Q86XN7 944 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 MARCH9Q86YJ5 346 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 SLC22A18ASQ8N1D0 253 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 NETO2Q8NC67 525 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 GDAP1L1Q96MZ0 367 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 KLF6Q99612 283 aaPredicted RBP10.95□□□□□ -0.66
SEC13-214ENST00000476597 EIF3CQ99613 913 aaKnown RBP10.95□□□□□ -0.66
SEC13-214ENST00000476597 CPEB1Q9BZB8 566 aaKnown RBP10.95□□□□□ -0.66
SEC13-214ENST00000476597 TRIM7Q9C029 511 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 ISCUQ9H1K1 167 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 CCDC86Q9H6F5 360 aaKnown RBP10.95□□□□□ -0.66
SEC13-214ENST00000476597 LRRC19Q9H756 370 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 CBX8Q9HC52 389 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 GPR27Q9NS67 375 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 GPATCH2LQ9NWQ4 482 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 CNOT8Q9UFF9 292 aaKnown RBP10.95□□□□□ -0.66
SEC13-214ENST00000476597 PCSK1NQ9UHG2 260 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 FAM208BQ5VWN6 2430 aa10.95□□□□□ -0.66
SEC13-214ENST00000476597 FAM149AA5PLN7 773 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 TRABD2BA6NFA1 517 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 A6NNZ2 444 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 J3KR12 359 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 EEF2KO00418 725 aaKnown RBP10.94□□□□□ -0.66
SEC13-214ENST00000476597 TRIM38O00635 465 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 FPGTO14772 594 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 INSIG1O15503 277 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 SPINT1O43278 529 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
SEC13-214ENST00000476597 RFPL3O75679 317 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 RNF8O76064 485 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 IGSF6O95976 241 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 TIMP2P16035 220 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 MIPP30301 263 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 PBX1P40424 430 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 TPI1P60174 286 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 RHOAP61586 193 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 ZNF211Q13398 564 aaPredicted RBP10.94□□□□□ -0.66
SEC13-214ENST00000476597 ILKQ13418 452 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 KLHL40Q2TBA0 621 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 HGSNATQ68CP4 663 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 KYAT3Q6YP21 454 aaKnown RBP10.94□□□□□ -0.66
SEC13-214ENST00000476597 DENND6BQ8NEG7 585 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 MDM1Q8TC05 714 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 HCAR2Q8TDS4 363 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 ARHGEF26Q96DR7 871 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 PEBP4Q96S96 227 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 KCTD15Q96SI1 283 aaPredicted RBP10.94□□□□□ -0.66
SEC13-214ENST00000476597 CALN1Q9BXU9 219 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 SLC39A8Q9C0K1 460 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 DHX35Q9H5Z1 703 aaKnown RBP10.94□□□□□ -0.66
SEC13-214ENST00000476597 PDFQ9HBH1 243 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 UCKL1Q9NWZ5 548 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 DKK3Q9UBP4 350 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 UBA2Q9UBT2 640 aaPredicted RBP10.94□□□□□ -0.66
SEC13-214ENST00000476597 DKK4Q9UBT3 224 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 GGT7Q9UJ14 662 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 AP4E1Q9UPM8 1137 aa10.94□□□□□ -0.66
SEC13-214ENST00000476597 APC2O95996 2303 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 PLXNA2O75051 1894 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 SPTY2D1-AS1A0A0U1RR47 76 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 A0A1W2PQJ5 194 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 SYCE3A1L190 88 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 NEMP1O14524 444 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 DAPK3O43293 454 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 SIGLEC6O43699 453 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 PRPSAP2O60256 369 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 PRAMEF11O60813 436 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 PIAS2O75928 621 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 GIMD1P0DJR0 217 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 MYBL1P10243 752 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 JUPP14923 745 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 ERCC2P18074 760 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 ITIH2P19823 946 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 ACP1P24666 158 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 RABIFP47224 123 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 HCAR3P49019 387 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 PAPOLAP51003 745 aaKnown RBP10.93□□□□□ -0.66
SEC13-214ENST00000476597 SUOXP51687 545 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 ZNF135P52742 658 aaPredicted RBP10.93□□□□□ -0.66
SEC13-214ENST00000476597 PFN3P60673 137 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 FANCCQ00597 558 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 FZD2Q14332 565 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 ACAP1Q15027 740 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 AFMIDQ63HM1 303 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 RFX8Q6ZV50 586 aa10.93□□□□□ -0.66
SEC13-214ENST00000476597 CYP4V2Q6ZWL3 525 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms