RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 KLHL31Q9H511 634 aa5.22□□□□□ -1.57
PTCD3-211ENST00000476215 SIRT3Q9NTG7 399 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-211ENST00000476215 SARDHQ9UL12 918 aa5.22□□□□□ -1.57
PTCD3-211ENST00000476215 TYW5A2RUC4 315 aaKnown RBP5.21□□□□□ -1.58
PTCD3-211ENST00000476215 H3BNX3 289 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 RTN3O95197 1032 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-211ENST00000476215 TBX18O95935 607 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 CENPAP49450 140 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 PTP4A2Q12974 167 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 RUNX2Q13950 521 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 VEPH1Q14D04 833 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 TAF11Q15544 211 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 ODF3L2Q3SX64 289 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 RSRC2Q7L4I2 434 aaKnown RBP5.21□□□□□ -1.58
PTCD3-211ENST00000476215 CTU1Q7Z7A3 348 aaKnown RBP5.21□□□□□ -1.58
PTCD3-211ENST00000476215 C7orf57Q8NEG2 295 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 BICD2Q8TD16 824 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 SLC35F5Q8WV83 523 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 RFFLQ8WZ73 363 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 RNF183Q96D59 192 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 NUF2Q9BZD4 464 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 MVB12BQ9H7P6 319 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 SMC4Q9NTJ3 1288 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 C20orf141Q9NUB4 165 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 SPATS2LQ9NUQ6 558 aaKnown RBP5.21□□□□□ -1.58
PTCD3-211ENST00000476215 MPP6Q9NZW5 540 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 CTNNAL1Q9UBT7 734 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 HSPB7Q9UBY9 170 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 SQORQ9Y6N5 450 aa5.21□□□□□ -1.58
PTCD3-211ENST00000476215 A0A1W2PPH5 198 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 CBY3A6NI87 242 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 B4E171 279 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 EBAG9O00559 213 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 TNFSF14O43557 240 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 BMP15O95972 392 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 ABCD1P33897 745 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 TSPAN7P41732 249 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 POLD2P49005 469 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 HARS2P49590 506 aaKnown RBP5.2□□□□□ -1.58
PTCD3-211ENST00000476215 ENTPD1P49961 510 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 RASSF2P50749 326 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 CLCN5P51795 746 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 SELENOVP59797 346 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 NEXNQ0ZGT2 675 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 CAPSQ13938 189 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 GPR18Q14330 331 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 DUSP6Q16828 381 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 DCAF12L2Q5VW00 463 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 ATG9BQ674R7 924 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 FAAH2Q6GMR7 532 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 CES5AQ6NT32 575 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 ATF7IPQ6VMQ6 1270 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 TBC1D26Q86UD7 250 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 PALB2Q86YC2 1186 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 KIAA2013Q8IYS2 634 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 TMEM18Q96B42 140 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 KLHL29Q96CT2 875 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 VCPIP1Q96JH7 1222 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 GFM1Q96RP9 751 aaKnown RBP5.2□□□□□ -1.58
PTCD3-211ENST00000476215 YME1L1Q96TA2 773 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 NPFFR1Q9GZQ6 430 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 USP44Q9H0E7 712 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 PDCL3Q9H2J4 239 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 ZHX3Q9H4I2 956 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 KRCC1Q9NPI7 259 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-211ENST00000476215 NCKIPSDQ9NZQ3 722 aa5.2□□□□□ -1.58
PTCD3-211ENST00000476215 B4DGG1 531 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 ATP2C2O75185 946 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 CYP1A2P05177 515 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 TFPIP10646 304 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 ZNF8P17098 575 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-211ENST00000476215 PTPN2P17706 415 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 EDN2P20800 178 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 EPHA8P29322 1005 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-211ENST00000476215 TTKP33981 857 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 ARL1P40616 181 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-211ENST00000476215 CTCFP49711 727 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-211ENST00000476215 CCR9P51686 369 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 EFNA5P52803 228 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 FOXG1P55316 489 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-211ENST00000476215 TSTQ16762 297 aaKnown RBP5.19□□□□□ -1.58
PTCD3-211ENST00000476215 PLEKHO1Q53GL0 409 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-211ENST00000476215 AWAT2Q6E213 333 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 INO80CQ6PI98 192 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-211ENST00000476215 Q6ZTK2 550 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 TECPR1Q7Z6L1 1165 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 RBFAQ8N0V3 343 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 MCPH1Q8NEM0 835 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 PPHLN1Q8NEY8 458 aaKnown RBP5.19□□□□□ -1.58
PTCD3-211ENST00000476215 UCMAQ8WVF2 138 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 ZBTB9Q96C00 473 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 SAAL1Q96ER3 474 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 ZC3HAV1LQ96H79 300 aaKnown RBP5.19□□□□□ -1.58
PTCD3-211ENST00000476215 APOLD1Q96LR9 279 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 FAM234AQ9H0X4 552 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 CDT1Q9H211 546 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 CATSPERBQ9H7T0 1116 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 PCDHB16Q9NRJ7 776 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 TAS2R10Q9NYW0 307 aa5.19□□□□□ -1.58
PTCD3-211ENST00000476215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms