RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 KCNT1Q5JUK3 1230 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 TXNRD3NBQ6F5E7 133 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 MFSD7Q6UXD7 560 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 ZNF783Q6ZMS7 281 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 DBX2Q6ZNG2 339 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 OR2T34Q8NGX1 318 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.91■□□□□ 0.14
CPSF3-203ENST00000475482 RAPGEF5Q92565 580 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 PEBP4Q96S96 227 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 ZNF670Q9BS34 389 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 SNRNP25Q9BV90 132 aaKnown RBP15.91■□□□□ 0.14
CPSF3-203ENST00000475482 C2orf49Q9BVC5 232 aaPredicted RBP15.91■□□□□ 0.14
CPSF3-203ENST00000475482 CALN1Q9BXU9 219 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 OSBPL2Q9H1P3 480 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 RETREG1Q9H6L5 497 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 TM9SF3Q9HD45 589 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 VPS51Q9UID3 782 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 SLC25A13Q9UJS0 675 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 SARDHQ9UL12 918 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 FZD10Q9ULW2 581 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 NEU3Q9UQ49 428 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 hCG_1818297A0A087WSY0 165 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 CXorf51AA0A1B0GTR3 108 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 A0A1W2PPC4 97 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 SNAP91O60641 907 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 ZMPSTE24O75844 475 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 RHOCP08134 193 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 ZFXP17010 805 aaPredicted RBP15.9■□□□□ 0.14
CPSF3-203ENST00000475482 ARL4AP40617 200 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 PSMD8P48556 350 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 FNTAP49354 379 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 CCR5P51681 352 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 CLCN6P51797 869 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 SCAPQ12770 1279 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 DHX34Q14147 1143 aaKnown RBP15.9■□□□□ 0.14
CPSF3-203ENST00000475482 DPYSL2Q16555 572 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 TAZQ16635 292 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 CYP1B1Q16678 543 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 C6orf118Q5T5N4 469 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 AADACL2Q6P093 401 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 NCEH1Q6PIU2 408 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 IL27RAQ6UWB1 636 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 TFAP2DQ7Z6R9 452 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 NOA1Q8NC60 698 aaKnown RBP15.9■□□□□ 0.14
CPSF3-203ENST00000475482 LRRN4CLQ8ND94 238 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 FAM71BQ8TC56 605 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 GRK7Q8WTQ7 553 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 MAGOHBQ96A72 148 aaKnown RBP15.9■□□□□ 0.14
CPSF3-203ENST00000475482 CNTNAP3BQ96NU0 1288 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 KRT12Q99456 494 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 OMDQ99983 421 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 CNTNAP3Q9BZ76 1288 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 ZYG11BQ9C0D3 744 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 MUC3BQ9H195 1237 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 SLC32A1Q9H598 525 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 DHX35Q9H5Z1 703 aaKnown RBP15.9■□□□□ 0.14
CPSF3-203ENST00000475482 EBF2Q9HAK2 575 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 KLHL11Q9NVR0 708 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 ANGPTL2Q9UKU9 493 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 TPX2Q9ULW0 747 aaKnown RBP15.9■□□□□ 0.14
CPSF3-203ENST00000475482 CACNA1BQ00975 2339 aa15.9■□□□□ 0.14
CPSF3-203ENST00000475482 LRRC72A6NJI9 287 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 C3orf70A6NLC5 250 aaPredicted RBP15.89■□□□□ 0.13
CPSF3-203ENST00000475482 SLC7A4O43246 635 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 LATO43561 262 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 RNASEH2AO75792 299 aaKnown RBP15.89■□□□□ 0.13
CPSF3-203ENST00000475482 FSBPO95073 299 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 IL1BP01584 269 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 KCNA4P22459 653 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 OR1E1P30953 314 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 CSNK1EP49674 416 aaKnown RBP15.89■□□□□ 0.13
CPSF3-203ENST00000475482 METAP1P53582 386 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 ADPRHP54922 357 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 KLF1Q13351 362 aaPredicted RBP15.89■□□□□ 0.13
CPSF3-203ENST00000475482 HNRNPDQ14103 355 aaKnown RBP15.89■□□□□ 0.13
CPSF3-203ENST00000475482 CCNG2Q16589 344 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 KAZNQ674X7 775 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 Q6ZVU0 165 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 BBS12Q6ZW61 710 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 CYP4V2Q6ZWL3 525 aaPredicted RBP15.89■□□□□ 0.13
CPSF3-203ENST00000475482 ADAT2Q7Z6V5 191 aaKnown RBP15.89■□□□□ 0.13
CPSF3-203ENST00000475482 DSG4Q86SJ6 1040 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 NLRP14Q86W24 1093 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 RFX6Q8HWS3 928 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 KLHL7Q8IXQ5 586 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 OR2A12Q8NGT7 310 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 GANCQ8TET4 914 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 OR8D1Q8WZ84 308 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 HEMGNQ9BXL5 484 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 KDM4CQ9H3R0 1056 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 LRRC19Q9H756 370 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 ARGLU1Q9NWB6 273 aaPredicted RBP15.89■□□□□ 0.13
CPSF3-203ENST00000475482 OR12D3Q9UGF7 316 aa15.89■□□□□ 0.13
CPSF3-203ENST00000475482 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.89■□□□□ 0.13
CPSF3-203ENST00000475482 V9GYY5 206 aaPredicted RBP15.89■□□□□ 0.13
CPSF3-203ENST00000475482 A0A1B0GVT2 93 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 FAM72CH0Y354 149 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 H3BRJ5 948 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 K7ERQ8 282 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 SMAD6O43541 496 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms