RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 NEK5Q6P3R8 708 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 NCEH1Q6PIU2 408 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 GDPD4Q6W3E5 623 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 ERN2Q76MJ5 926 aaKnown RBP17.15■□□□□ 0.34
SCAF11-206ENST00000474828 OR2T34Q8NGX1 318 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 C1orf216Q8TAB5 229 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 FOXJ1Q92949 421 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 RAB7BQ96AH8 199 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 PPP1R16AQ96I34 528 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 ALS2CR12Q96Q35 445 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 LGMNQ99538 433 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 OMDQ99983 421 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 ORAI3Q9BRQ5 295 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 CINPQ9BW66 212 aaPredicted RBP17.15■□□□□ 0.34
SCAF11-206ENST00000474828 TLR10Q9BXR5 811 aa17.15■□□□□ 0.34
SCAF11-206ENST00000474828 EVLQ9UI08 416 aaPredicted RBP17.15■□□□□ 0.34
SCAF11-206ENST00000474828 BCLAF3A2AJT9 711 aaKnown RBP17.14■□□□□ 0.33
SCAF11-206ENST00000474828 HACD1B0YJ81 288 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 KPNA3O00505 521 aaPredicted RBP17.14■□□□□ 0.33
SCAF11-206ENST00000474828 KRIT1O00522 736 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 AREL1O15033 823 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 INSIG1O15503 277 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 HTRA2O43464 458 aaPredicted RBP17.14■□□□□ 0.33
SCAF11-206ENST00000474828 LATO43561 262 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 RNASEH2AO75792 299 aaKnown RBP17.14■□□□□ 0.33
SCAF11-206ENST00000474828 SEMA4FO95754 770 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 GKP32189 559 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 CETN2P41208 172 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 DPP6P42658 865 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 CCR5P51681 352 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 SUOXP51687 545 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 RPL6Q02878 288 aaKnown RBP17.14■□□□□ 0.33
SCAF11-206ENST00000474828 CACUL1Q86Y37 369 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 CCDC50Q8IVM0 306 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 BBS5Q8N3I7 341 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 CNTD1Q8N815 330 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 GRIN3AQ8TCU5 1115 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 NSMCE1Q8WV22 266 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 P3H4Q92791 437 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 TADA1Q96BN2 335 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 GPR174Q9BXC1 333 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 ZDHHC6Q9H6R6 413 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 PREBQ9HCU5 417 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 SAE1Q9UBE0 346 aaPredicted RBP17.14■□□□□ 0.33
SCAF11-206ENST00000474828 RAB23Q9ULC3 237 aa17.14■□□□□ 0.33
SCAF11-206ENST00000474828 SPAG17Q6Q759 2223 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.13■□□□□ 0.33
SCAF11-206ENST00000474828 C16orf96A6NNT2 1141 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 SPINT1O43278 529 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 MAP3K13O43283 966 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 BNIP3LO60238 219 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 SOCS5O75159 536 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 TJP3O95049 919 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 IGHV4-34P06331 123 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 PTGER3P43115 390 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 NEK3P51956 506 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 DYNLT1P63172 113 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 ZNF235Q14590 738 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 IHHQ14623 411 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 RPS6KA1Q15418 735 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 SLC14A2Q15849 920 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 KAZNQ674X7 775 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 AADACL2Q6P093 401 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 PRR23BQ6ZRT6 265 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 PARS2Q7L3T8 475 aaKnown RBP17.13■□□□□ 0.33
SCAF11-206ENST00000474828 TRIM69Q86WT6 500 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 TMEFF1Q8IYR6 380 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 ABCA7Q8IZY2 2146 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 OR6K2Q8NGY2 324 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 ARRDC2Q8TBH0 407 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 RUBCNQ92622 972 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 EXOC2Q96KP1 924 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 QKIQ96PU8 341 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCAF11-206ENST00000474828 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 SUV39H2Q9H5I1 410 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 C6orf106Q9H6K1 298 aaPredicted RBP17.13■□□□□ 0.33
SCAF11-206ENST00000474828 PILRBQ9UKJ0 227 aa17.13■□□□□ 0.33
SCAF11-206ENST00000474828 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.13■□□□□ 0.33
SCAF11-206ENST00000474828 A0A1W2PQ67 120 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 LRRC72A6NJI9 287 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 MTSS1O43312 755 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 NDUFS2O75306 463 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 UGT2B4P06133 528 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 ADRB3P13945 408 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 WASHC5Q12768 1159 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 ZBTB17Q13105 803 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 BRAT1Q6PJG6 821 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.12■□□□□ 0.33
SCAF11-206ENST00000474828 ZSCAN30Q86W11 494 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 CCNYQ8ND76 341 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 ACTL9Q8TC94 416 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 TFB1MQ8WVM0 346 aaKnown RBP17.12■□□□□ 0.33
SCAF11-206ENST00000474828 KLHL32Q96NJ5 620 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 POLR1EQ9GZS1 481 aaKnown RBP17.12■□□□□ 0.33
SCAF11-206ENST00000474828 ATP13A3Q9H7F0 1226 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 NOD2Q9HC29 1040 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 RBM22Q9NW64 420 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCAF11-206ENST00000474828 PYCARDQ9ULZ3 195 aa17.12■□□□□ 0.33
SCAF11-206ENST00000474828 JRKLQ9Y4A0 524 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms