RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 BAHD1Q8TBE0 780 aaPredicted RBP20.77■□□□□ 0.92
SNX13-206ENST00000474067 ZNF641Q96N77 438 aaPredicted RBP20.77■□□□□ 0.92
SNX13-206ENST00000474067 THAP2Q9H0W7 228 aa20.77■□□□□ 0.92
SNX13-206ENST00000474067 EVA1BQ9NVM1 165 aa20.77■□□□□ 0.92
SNX13-206ENST00000474067 UVRAGQ9P2Y5 699 aa20.77■□□□□ 0.92
SNX13-206ENST00000474067 MSRB2Q9Y3D2 182 aa20.77■□□□□ 0.92
SNX13-206ENST00000474067 FPGTO14772 594 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 PRAMEF11O60813 436 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 PALMO75781 387 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 H2AFZP0C0S5 128 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 THEGLP0DJG4 465 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 EPHA8P29322 1005 aaPredicted RBP20.76■□□□□ 0.91
SNX13-206ENST00000474067 IL10RBQ08334 325 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 MAPK8IP2Q13387 824 aaPredicted RBP20.76■□□□□ 0.91
SNX13-206ENST00000474067 TMEM259Q4ZIN3 620 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 BRAT1Q6PJG6 821 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 TMCO3Q6UWJ1 677 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 H2AFVQ71UI9 128 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 TTC7BQ86TV6 843 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 PAF1Q8N7H5 531 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 KLHL32Q96NJ5 620 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 ZNF599Q96NL3 588 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 LENG8Q96PV6 779 aaPredicted RBP20.76■□□□□ 0.91
SNX13-206ENST00000474067 NUP85Q9BW27 656 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 CINPQ9BW66 212 aaPredicted RBP20.76■□□□□ 0.91
SNX13-206ENST00000474067 MAGEB5Q9BZ81 275 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 NOL6Q9H6R4 1146 aaKnown RBP20.76■□□□□ 0.91
SNX13-206ENST00000474067 RCOR3Q9P2K3 495 aaPredicted RBP20.76■□□□□ 0.91
SNX13-206ENST00000474067 SPTBN2O15020 2390 aa20.76■□□□□ 0.91
SNX13-206ENST00000474067 A0A087X0T9 212 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 A0A1W2PQ67 120 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 SSU72P8A0A1W2PR75 194 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 H3BM21 787 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 RIOK3O14730 519 aaKnown RBP20.75■□□□□ 0.91
SNX13-206ENST00000474067 CYP1A2P05177 515 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 C1SP09871 688 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 FAM228BP0C875 321 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 HSPA9P38646 679 aaKnown RBP20.75■□□□□ 0.91
SNX13-206ENST00000474067 RABIFP47224 123 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 CSNK1DP48730 415 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 PAPOLAP51003 745 aaKnown RBP20.75■□□□□ 0.91
SNX13-206ENST00000474067 SLC18A3Q16572 532 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 ERAP2Q6P179 960 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 KYAT3Q6YP21 454 aaKnown RBP20.75■□□□□ 0.91
SNX13-206ENST00000474067 RAB44Q7Z6P3 723 aaPredicted RBP20.75■□□□□ 0.91
SNX13-206ENST00000474067 LRRC49Q8IUZ0 686 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 OR6K2Q8NGY2 324 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 CXorf40AQ8TE69 158 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 SAP25Q8TEE9 199 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 KCTD15Q96SI1 283 aaPredicted RBP20.75■□□□□ 0.91
SNX13-206ENST00000474067 ATP13A3Q9H7F0 1226 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 GPATCH2LQ9NWQ4 482 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 PCDHGA1Q9Y5H4 931 aa20.75■□□□□ 0.91
SNX13-206ENST00000474067 FAM221BA6H8Z2 402 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 NEMP2A6NFY4 417 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 DFFAO00273 331 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 KCNK3O14649 394 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 ALPPL2P10696 532 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 PRLRP16471 622 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 SERPINA4P29622 427 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 SSR1P43307 286 aaKnown RBP20.74■□□□□ 0.91
SNX13-206ENST00000474067 POLR2LP62875 67 aaKnown RBP20.74■□□□□ 0.91
SNX13-206ENST00000474067 NSUN2Q08J23 767 aaKnown RBP eCLIP20.74■□□□□ 0.91
SNX13-206ENST00000474067 PTK2BQ14289 1009 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 KRT81Q14533 505 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 ST3GAL2Q16842 350 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 UNQ6494/PRO21346Q6UXR6 183 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 LEKR1Q6ZMV7 388 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 ABI3BPQ7Z7G0 1075 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 MAP7D3Q8IWC1 876 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 ARFGAP1Q8N6T3 406 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 TMEM131Q92545 1883 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 PEBP4Q96S96 227 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 CALN1Q9BXU9 219 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 SLC39A8Q9C0K1 460 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 PDFQ9HBH1 243 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.74■□□□□ 0.91
SNX13-206ENST00000474067 KLHL11Q9NVR0 708 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 IPO11Q9UI26 975 aaKnown RBP20.74■□□□□ 0.91
SNX13-206ENST00000474067 ACTL7AQ9Y615 435 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 LAMA1P25391 3075 aa20.74■□□□□ 0.91
SNX13-206ENST00000474067 HYAL3O43820 417 aaPredicted RBP20.73■□□□□ 0.91
SNX13-206ENST00000474067 AKR1B10O60218 316 aa20.73■□□□□ 0.91
SNX13-206ENST00000474067 LDOC1O95751 146 aaPredicted RBP20.73■□□□□ 0.91
SNX13-206ENST00000474067 FAM193AP78312 1265 aa20.73■□□□□ 0.91
SNX13-206ENST00000474067 IL9RQ01113 521 aa20.73■□□□□ 0.91
SNX13-206ENST00000474067 KCNT1Q5JUK3 1230 aa20.73■□□□□ 0.91
SNX13-206ENST00000474067 ATXN7L2Q5T6C5 722 aaPredicted RBP20.73■□□□□ 0.91
SNX13-206ENST00000474067 CNGA4Q8IV77 575 aa20.73■□□□□ 0.91
SNX13-206ENST00000474067 ZNF564Q8TBZ8 553 aaPredicted RBP20.73■□□□□ 0.91
SNX13-206ENST00000474067 HSPH1Q92598 858 aa20.73■□□□□ 0.91
SNX13-206ENST00000474067 CELF6Q96J87 481 aaKnown RBP20.73■□□□□ 0.91
SNX13-206ENST00000474067 C1QTNF2Q9BXJ5 285 aa20.73■□□□□ 0.91
SNX13-206ENST00000474067 CWC15Q9P013 229 aaKnown RBP20.73■□□□□ 0.91
SNX13-206ENST00000474067 CTTNBP2NLQ9P2B4 639 aa20.73■□□□□ 0.91
SNX13-206ENST00000474067 SEPT3Q9UH03 358 aa20.73■□□□□ 0.91
SNX13-206ENST00000474067 ZFR2Q9UPR6 939 aaKnown RBP20.73■□□□□ 0.91
SNX13-206ENST00000474067 WASF3Q9UPY6 502 aa20.73■□□□□ 0.91
SNX13-206ENST00000474067 TP53BP1Q12888 1972 aaPredicted RBP20.73■□□□□ 0.91
SNX13-206ENST00000474067 COL5A1P20908 1838 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms