RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 MKRN2Q9H000 416 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 C10orf88Q9H8K7 445 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 KCNK12Q9HB15 430 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 USP29Q9HBJ7 922 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 SAR1AQ9NR31 198 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 ABCF3Q9NUQ8 709 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 MKS1Q9NXB0 559 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 NSMCE4AQ9NXX6 385 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 DONSONQ9NYP3 566 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 BFARQ9NZS9 450 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 SEPT10Q9P0V9 454 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 PRKAG3Q9UGI9 489 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 BAIAP2L1Q9UHR4 511 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 GPR160Q9UJ42 338 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 TRHDEQ9UKU6 1024 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 RPL26L1Q9UNX3 145 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 CDY2AQ9Y6F7 541 aa6.01□□□□□ -1.45
ATPAF1-204ENST00000474020 ANK1P16157 1881 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 MCM3APO60318 1980 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 SYNJ2BP-COX16A0A087WUM0 186 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 A0A1W2PPM1 405 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 TCRBV7S3A2A0A539 114 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 TMEM82A0PJX8 343 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 MAGEB16A2A368 324 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 GOLGA8RI6L899 631 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 BIRC5O15392 142 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 MGRN1O60291 552 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 PSPNO60542 156 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 CCDC22O60826 627 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 GLRA3O75311 464 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 H2AFYO75367 372 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 DGKIO75912 1065 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 FAM155BO75949 473 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 ATP6V1G2O95670 118 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 IL1BP01584 269 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 LMNAP02545 664 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 LTFP02788 710 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 SYPP08247 313 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 HSPA1AP0DMV8 641 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 HSPA1BP0DMV9 641 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 NCAM1P13591 858 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 GOT1P17174 413 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 GLDCP23378 1020 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 VAMP1P23763 118 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 CCND1P24385 295 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 GCAP28676 217 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 HADHAP40939 763 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 KIR2DL1P43626 348 aaPredicted RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 KIR2DL2P43627 348 aaPredicted RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 PSMC4P43686 418 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 GLUD2P49448 558 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 MAP3K7CLP57077 242 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 NCALDP61601 193 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 ELF3P78545 371 aaPredicted RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 HTRA3P83110 453 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 TMPRSS15P98073 1019 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 PURAQ00577 322 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 BEX3Q00994 111 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 GBE1Q04446 702 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 CDK18Q07002 472 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 SCAPQ12770 1279 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 SF3A3Q12874 501 aaKnown RBP eCLIP6□□□□□ -1.45
ATPAF1-204ENST00000474020 ILF2Q12905 390 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 GRIK3Q13003 919 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 EFTUD2Q15029 972 aaKnown RBP eCLIP6□□□□□ -1.45
ATPAF1-204ENST00000474020 PAFAH1B3Q15102 231 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 PRKD1Q15139 912 aaPredicted RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 SLC1A5Q15758 541 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 CA9Q16790 459 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 FBLN7Q53RD9 439 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 ANKRD20A2Q5SQ80 823 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 PRAMEF19Q5SWL8 479 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 UBXN11Q5T124 520 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 STXBP5Q5T5C0 1151 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 FAXCQ5TGI0 409 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 ANKRD20A1Q5TYW2 823 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 WSCD1Q658N2 575 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 NCBP2-AS2Q69YL0 99 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 NAPEPLDQ6IQ20 393 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 TRNP1Q6NT89 227 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 LRRC8BQ6P9F7 803 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 KYAT3Q6YP21 454 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 UNC5AQ6ZN44 842 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 C4orf50Q6ZRC1 276 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 RFX8Q6ZV50 586 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 CYP4V2Q6ZWL3 525 aaPredicted RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 MARK2Q7KZI7 788 aaKnown RBP6□□□□□ -1.45
ATPAF1-204ENST00000474020 NLRP9Q7RTR0 991 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 PID1Q7Z2X4 250 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 LIMS2Q7Z4I7 341 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 LINC00523Q86TU6 105 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 CEP57Q86XR8 500 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 ECHDC2Q86YB7 292 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 CRLF3Q8IUI8 442 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 NUDCD3Q8IVD9 361 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 CCDC185Q8N715 623 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 COLGALT1Q8NBJ5 622 aa6□□□□□ -1.45
ATPAF1-204ENST00000474020 PIWIL1Q96J94 861 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms