RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 FAM182AQ5T1J6 154 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 UBAP2Q5T6F2 1119 aaKnown RBP12.98□□□□□ -0.33
VPS13D-205ENST00000473099 CAPN12Q6ZSI9 719 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 NLRP9Q7RTR0 991 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 TMEM135Q86UB9 458 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 APCDD1Q8J025 514 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 AHI1Q8N157 1196 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 AGGF1Q8N302 714 aaeCLIP12.98□□□□□ -0.33
VPS13D-205ENST00000473099 MPP5Q8N3R9 675 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 GABPB2Q8TAK5 448 aaPredicted RBP12.98□□□□□ -0.33
VPS13D-205ENST00000473099 FAM76AQ8TAV0 307 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 EPS8L3Q8TE67 593 aaKnown RBP12.98□□□□□ -0.33
VPS13D-205ENST00000473099 TLCD1Q96CP7 247 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 NECTIN4Q96NY8 510 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 RANBP9Q96S59 729 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 KIFC1Q9BW19 673 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 SENP1Q9P0U3 644 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 VPS18Q9P253 973 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 BCCIPQ9P287 314 aaKnown RBP eCLIP12.98□□□□□ -0.33
VPS13D-205ENST00000473099 GGA2Q9UJY4 613 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 HS3ST2Q9Y278 367 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 CDH23Q9H251 3354 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 TICRRQ7Z2Z1 1910 aa12.98□□□□□ -0.33
VPS13D-205ENST00000473099 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.97□□□□□ -0.33
VPS13D-205ENST00000473099 HEATR9A2RTY3 570 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 SMIM23A6NLE4 172 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 A6NNZ2 444 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 HEPACAM2A8MVW5 462 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 POC1B-GALNT4F8VUJ3 575 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 NDST3O95803 873 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 IGSF6O95976 241 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 ASLP04424 464 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 CYP17A1P05093 508 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 INHBAP08476 426 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 ALADP13716 330 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 PAMP19021 973 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 ADRA1DP25100 572 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 HLA-FP30511 346 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 CD70P32970 193 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
VPS13D-205ENST00000473099 SCNN1BP51168 640 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 CDK18Q07002 472 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 MTM1Q13496 603 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 GRM3Q14832 879 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 COL19A1Q14993 1142 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 SLC1A5Q15758 541 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 PCSK7Q16549 785 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 TUBB8Q3ZCM7 444 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 TNFAIP8L3Q5GJ75 292 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 LGSNQ5TDP6 509 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 DENND5AQ6IQ26 1287 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 ADGRD1Q6QNK2 874 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 KIAA0907Q7Z7F0 614 aaPredicted RBP12.97□□□□□ -0.33
VPS13D-205ENST00000473099 LRRC6Q86X45 466 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS13D-205ENST00000473099 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS13D-205ENST00000473099 PEX13Q92968 403 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 GUCD1Q96NT3 240 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 APOL2Q9BQE5 337 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 CEP44Q9C0F1 390 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 S1PR5Q9H228 398 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 LINC00597Q9H2U6 94 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 EURLQ9NYK6 297 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 MOCS1Q9NZB8 636 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 LHX3Q9UBR4 397 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 PRKAG3Q9UGI9 489 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 ZNF180Q9UJW8 692 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 FBXO10Q9UK96 956 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 ACTL7BQ9Y614 415 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 RPS6KL1Q9Y6S9 549 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 FAM169AQ9Y6X4 670 aa12.97□□□□□ -0.33
VPS13D-205ENST00000473099 COL4A3Q01955 1670 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.96□□□□□ -0.33
VPS13D-205ENST00000473099 IQANK1A0A1B0GTG1 560 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 FAM159BA6NKW6 160 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 DLL1O00548 723 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 MUSKO15146 869 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
VPS13D-205ENST00000473099 ATP9BO43861 1147 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 PAPSS2O95340 614 aaPredicted RBP12.96□□□□□ -0.33
VPS13D-205ENST00000473099 CD160O95971 181 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 POLR2EP19388 210 aaKnown RBP12.96□□□□□ -0.33
VPS13D-205ENST00000473099 CNTFP26441 200 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 NNMTP40261 264 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 VIPR2P41587 438 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 SLCO1A2P46721 670 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 SERPINB9P50453 376 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 SNRPD1P62314 119 aaKnown RBP12.96□□□□□ -0.33
VPS13D-205ENST00000473099 MGAT5Q09328 741 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 FCHO2Q0JRZ9 810 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 KBTBD12Q3ZCT8 623 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 PREPLQ4J6C6 727 aaPredicted RBP12.96□□□□□ -0.33
VPS13D-205ENST00000473099 ANKRD20A4Q4UJ75 823 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 CERCAMQ5T4B2 595 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 EMC10Q5UCC4 262 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 PKN3Q6P5Z2 889 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 MTSS1LQ765P7 747 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 SRLQ86TD4 932 aa12.96□□□□□ -0.33
VPS13D-205ENST00000473099 SLC26A11Q86WA9 606 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms