RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 PDZD7Q9H5P4 517 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 TMEM39AQ9NV64 488 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 GPATCH2LQ9NWQ4 482 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 CPNE7Q9UBL6 633 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 PRKAG2Q9UGJ0 569 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 SLC7A8Q9UHI5 535 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 TMEM59LQ9UK28 342 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 GJD2Q9UKL4 321 aa10.07□□□□□ -0.8
NUP50-214ENST00000469163 MRPS7Q9Y2R9 242 aaKnown RBP10.07□□□□□ -0.8
NUP50-214ENST00000469163 RRN3P2A6NIE6 340 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 C12orf71A8MTZ7 269 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 ZBTB42B2RXF5 422 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 SLC16A3O15427 465 aaKnown RBP10.06□□□□□ -0.8
NUP50-214ENST00000469163 YKT6O15498 198 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 SCO2O43819 266 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 FGGP02679 453 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 ALOX5P09917 674 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 ITIH1P19827 911 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 ITGALP20701 1170 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 HSD17B2P37059 387 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 SLC10A6Q3KNW5 377 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 ATP13A4Q4VNC1 1196 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 METTL11BQ5VVY1 283 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 DNAJC24Q6P3W2 148 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 DSG4Q86SJ6 1040 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 MARVELD2Q8N4S9 558 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 BEST2Q8NFU1 509 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 OR5H6Q8NGV6 325 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 TBC1D15Q8TC07 691 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 ISOC1Q96CN7 298 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 CDC14AQ9UNH5 594 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 CPQQ9Y646 472 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 COL2A1P02458 1487 aaPredicted RBP10.06□□□□□ -0.8
NUP50-214ENST00000469163 ZNF839A8K0R7 811 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 PLA2G4EQ3MJ16 856 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 C6orf52Q5T4I8 152 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 ATG14Q6ZNE5 492 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 SNX29P2Q8IUI4 249 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 C1orf127Q8N9H9 656 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 EDEM1Q92611 657 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 PRR11Q96HE9 360 aaPredicted RBP10.06□□□□□ -0.8
NUP50-214ENST00000469163 PIP5K1AQ99755 562 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 BTBD2Q9BX70 525 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 DNAJB4Q9UDY4 337 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 AMFRQ9UKV5 643 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 SIPA1L1O43166 1804 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 SERPINI2O75830 405 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 STBD1O95210 358 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 TP53P04637 393 aaPredicted RBP10.06□□□□□ -0.8
NUP50-214ENST00000469163 CALB1P05937 261 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 S100A6P06703 90 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 CPB1P15086 417 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 RAG1P15918 1043 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 ZNF33BQ06732 778 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 SLC27A1Q6PCB7 646 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 IGFN1Q86VF2 1251 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 CCDC105Q8IYK2 499 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 C1orf54Q8WWF1 131 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 DCUN1D1Q96GG9 259 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 NIFKQ9BYG3 293 aaKnown RBP10.06□□□□□ -0.8
NUP50-214ENST00000469163 OSBPL8Q9BZF1 889 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 DPEP3Q9H4B8 488 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 SAE1Q9UBE0 346 aaPredicted RBP10.06□□□□□ -0.8
NUP50-214ENST00000469163 FNDC3AQ9Y2H6 1198 aaKnown RBP10.06□□□□□ -0.8
NUP50-214ENST00000469163 IPPQ9Y573 584 aa10.06□□□□□ -0.8
NUP50-214ENST00000469163 PSME4Q14997 1843 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 UBE4BO95155 1302 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 DNAJA2O60884 412 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 TADA2AO75478 443 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 NADKO95544 446 aaPredicted RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 HSMCR30P0CW71 290 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 POU2F1P14859 743 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 ACO1P21399 889 aaKnown RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 LMO2P25791 158 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 L1CAMP32004 1257 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 MARCKSL1P49006 195 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 SLC26A2P50443 739 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 OLR1P78380 273 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 KCNC4Q03721 635 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 PPP1R3AQ16821 1122 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 LSM12Q3MHD2 195 aaKnown RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 FAM209BQ5JX69 171 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 MORN1Q5T089 497 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 MARCH8Q5T0T0 291 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 WSCD1Q658N2 575 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 KDELC2Q7Z4H8 507 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 PCSK9Q8NBP7 692 aaKnown RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 ZNF564Q8TBZ8 553 aaPredicted RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 PDCD6IPQ8WUM4 868 aaKnown RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 EMILIN2Q9BXX0 1053 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 ZNF696Q9H7X3 374 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 MCCC2Q9HCC0 563 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 BNIP3LO60238 219 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 EDF1O60869 148 aaKnown RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 CRTAMO95727 393 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 DARSP14868 501 aaKnown RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 CLCNKBP51801 687 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 XIAPP98170 497 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 TLE2Q04725 743 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 FGD3Q5JSP0 725 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms