RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 CCNYQ8ND76 341 aa6.09□□□□□ -1.44
SHQ1-205ENST00000468371 CKAP2Q8WWK9 683 aa6.09□□□□□ -1.44
SHQ1-205ENST00000468371 SCG3Q8WXD2 468 aaKnown RBP6.09□□□□□ -1.44
SHQ1-205ENST00000468371 IRGQQ8WZA9 623 aa6.09□□□□□ -1.44
SHQ1-205ENST00000468371 PPWD1Q96BP3 646 aaKnown RBP6.09□□□□□ -1.44
SHQ1-205ENST00000468371 SMOQ99835 787 aa6.09□□□□□ -1.44
SHQ1-205ENST00000468371 DHX35Q9H5Z1 703 aaKnown RBP6.09□□□□□ -1.44
SHQ1-205ENST00000468371 CATSPERBQ9H7T0 1116 aa6.09□□□□□ -1.44
SHQ1-205ENST00000468371 MANSC1Q9H8J5 431 aa6.09□□□□□ -1.44
SHQ1-205ENST00000468371 ATP13A1Q9HD20 1204 aa6.09□□□□□ -1.44
SHQ1-205ENST00000468371 ABCB8Q9NUT2 735 aa6.09□□□□□ -1.44
SHQ1-205ENST00000468371 PSMC3IPQ9P2W1 217 aaPredicted RBP6.09□□□□□ -1.44
SHQ1-205ENST00000468371 UVRAGQ9P2Y5 699 aa6.09□□□□□ -1.44
SHQ1-205ENST00000468371 SCINQ9Y6U3 715 aa6.09□□□□□ -1.44
SHQ1-205ENST00000468371 RBBP6Q7Z6E9 1792 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 DPPA5A6NC42 116 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 E5RJQ4 531 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 LZTS3O60299 673 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 UNC5CO95185 931 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 MAP3K6O95382 1288 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ASLP04424 464 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 PABPC1P11940 636 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 SERPINB3P29508 390 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TPI1P60174 286 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ENPEPQ07075 957 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 DYNC1I2Q13409 638 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ZNF235Q14590 738 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TRIP10Q15642 601 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 DBN1Q16643 649 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 NFIL3Q16649 462 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 CCDC142Q17RM4 750 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 RNF220Q5VTB9 566 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ARHGAP17Q68EM7 881 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 RFWD3Q6PCD5 774 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 CPNE8Q86YQ8 564 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TMPRSS6Q8IU80 811 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 LRRC57Q8N9N7 239 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 RLN3Q8WXF3 142 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 NMD3Q96D46 503 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ASIC4Q96FT7 647 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 C1QTNF7Q9BXJ2 289 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 PRDM16Q9HAZ2 1276 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ELOVL2Q9NXB9 296 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 SRRM3A6NNA2 597 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 CASQ2O14958 399 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 NPC1O15118 1278 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 KRT36O76013 467 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 VNN1O95497 513 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 NUDT17P0C025 328 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 RPA3P35244 121 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 PLA2G5P39877 138 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ARRB1P49407 418 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 USP46P62068 366 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 SLC7A9P82251 487 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 MMEL1Q495T6 779 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ATG16L1Q676U5 607 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 IZUMO2Q6UXV1 221 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TFAP2DQ7Z6R9 452 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ZNF677Q86XU0 584 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TMEM25Q86YD3 366 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 CFAP52Q8N1V2 620 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 DCLK2Q8N568 766 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TERB1Q8NA31 727 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 SLC4A11Q8NBS3 891 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 KBTBD7Q8WVZ9 684 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ATXN7L3BQ96GX2 97 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 RBM41Q96IZ5 413 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 BTN2A3PQ96KV6 586 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TMEM121Q9BTD3 319 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ARRDC1-AS1Q9H2J1 176 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 C12orf65Q9H3J6 166 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 Q9H521 79 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ZDHHC4Q9NPG8 344 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 AJAP1Q9UKB5 411 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 CCL26Q9Y258 94 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 KRT37O76014 449 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 STK10O94804 968 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 HNRNPCP07910 306 aaKnown RBP eCLIP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 MYL2P10916 166 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ETS2P15036 469 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ADRA1DP25100 572 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 OXTRP30559 389 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 SSTR1P30872 391 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 NOS2P35228 1153 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ASPAP45381 313 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 PEX5P50542 639 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ASPHQ12797 758 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 MED21Q13503 144 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 ZNF268Q14587 947 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 EIF4HQ15056 248 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 CYTH1Q15438 398 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TRIP4Q15650 581 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 HSF5Q4G112 596 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 COBLL1Q53SF7 1204 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 WLSQ5T9L3 541 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TTC27Q6P3X3 843 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 FAM131BQ86XD5 332 aa6.08□□□□□ -1.44
SHQ1-205ENST00000468371 WDR75Q8IWA0 830 aaKnown RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 RNF168Q8IYW5 571 aaPredicted RBP6.08□□□□□ -1.44
SHQ1-205ENST00000468371 TRIML2Q8N7C3 387 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms