RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 TRIM14Q14142 442 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 C2CD6Q53TS8 623 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 PARS2Q7L3T8 475 aaKnown RBP23.61■■□□□ 1.37
SSNA1-203ENST00000463511 PARGQ86W56 976 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 XYLT1Q86Y38 959 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 DCP2Q8IU60 420 aaKnown RBP23.61■■□□□ 1.37
SSNA1-203ENST00000463511 PCDH20Q8N6Y1 951 aaKnown RBP23.61■■□□□ 1.37
SSNA1-203ENST00000463511 IFI44Q8TCB0 444 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 SYN2Q92777 582 aaPredicted RBP23.61■■□□□ 1.37
SSNA1-203ENST00000463511 C18orf8Q96DM3 657 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 HIC2Q96JB3 615 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 AGPAT1Q99943 283 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 HEPHQ9BQS7 1158 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 SYT11Q9BT88 431 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 CEP44Q9C0F1 390 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 ZDHHC6Q9H6R6 413 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 EVA1BQ9NVM1 165 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 FCF1Q9Y324 198 aaKnown RBP23.61■■□□□ 1.37
SSNA1-203ENST00000463511 ACTL7AQ9Y615 435 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 LRRK1Q38SD2 2015 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 GOLGA8SH3BPF8 625 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 NME1P15531 152 aaKnown RBP23.6■■□□□ 1.37
SSNA1-203ENST00000463511 SCNN1AP37088 669 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 GABRB2P47870 512 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 DUSP3P51452 185 aaPredicted RBP23.6■■□□□ 1.37
SSNA1-203ENST00000463511 ARF5P84085 180 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 ACBD5Q5T8D3 534 aaPredicted RBP23.6■■□□□ 1.37
SSNA1-203ENST00000463511 TRNP1Q6NT89 227 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 PCSK4Q6UW60 755 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 ZNF783Q6ZMS7 281 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 FAM131BQ86XD5 332 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 DRC7Q8IY82 874 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 ZNF843Q8N446 348 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 MAPK15Q8TD08 544 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 FEM1CQ96JP0 617 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 PCDHB18PQ96TA0 734 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 ZYG11BQ9C0D3 744 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 USP29Q9HBJ7 922 aa23.6■■□□□ 1.37
SSNA1-203ENST00000463511 SPTY2D1-AS1A0A0U1RR47 76 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 H3BM21 787 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 DXOO77932 396 aaKnown RBP23.59■■□□□ 1.37
SSNA1-203ENST00000463511 CSF2P04141 144 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 CYP1A1P04798 512 aaPredicted RBP23.59■■□□□ 1.37
SSNA1-203ENST00000463511 SKILP12757 684 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 LSSP48449 732 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 GNA12Q03113 381 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 CDKN3Q16667 212 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 CARD16Q5EG05 197 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 ZCCHC8Q6NZY4 707 aaKnown RBP23.59■■□□□ 1.37
SSNA1-203ENST00000463511 LSMEM2Q8N112 164 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 CFAP57Q96MR6 1250 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 HAPLN3Q96S86 360 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 TM6SF2Q9BZW4 377 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 HAUS4Q9H6D7 363 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 POLR1BQ9H9Y6 1135 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 CPNE5Q9HCH3 593 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 KLF15Q9UIH9 416 aa23.59■■□□□ 1.37
SSNA1-203ENST00000463511 FLNBO75369 2602 aaKnown RBP23.59■■□□□ 1.37
SSNA1-203ENST00000463511 ASH1LQ9NR48 2969 aaKnown RBP23.58■■□□□ 1.37
SSNA1-203ENST00000463511 AP1G1O43747 822 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 LSM8O95777 96 aaKnown RBP23.58■■□□□ 1.37
SSNA1-203ENST00000463511 RABIFP47224 123 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 TMPRSS3P57727 454 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 NOMO3P69849 1222 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 SLC20A2Q08357 652 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 PDE1CQ14123 709 aaPredicted RBP23.58■■□□□ 1.37
SSNA1-203ENST00000463511 TPRG1LQ5T0D9 272 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 BROXQ5VW32 411 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 HGSNATQ68CP4 663 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 OR6K2Q8NGY2 324 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 HECAQ9UBI9 543 aaPredicted RBP23.58■■□□□ 1.37
SSNA1-203ENST00000463511 IPO11Q9UI26 975 aaKnown RBP23.58■■□□□ 1.37
SSNA1-203ENST00000463511 GGT7Q9UJ14 662 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 ITM2BQ9Y287 266 aa23.58■■□□□ 1.37
SSNA1-203ENST00000463511 COL6A6A6NMZ7 2263 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 IGLON5A6NGN9 336 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 PLA2G2AP14555 144 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 TGM2P21980 687 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 HNRNPH3P31942 346 aaKnown RBP23.57■■□□□ 1.36
SSNA1-203ENST00000463511 GKP32189 559 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 ERVPABLB-1P60509 514 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 KLHL30Q0D2K2 578 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 DEFB133Q30KQ1 61 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 GUSBP11Q6P575 273 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 TRIM72Q6ZMU5 477 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 ZNF571Q7Z3V5 609 aaPredicted RBP23.57■■□□□ 1.36
SSNA1-203ENST00000463511 BNIPLQ7Z465 357 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 RYBPQ8N488 228 aaPredicted RBP23.57■■□□□ 1.36
SSNA1-203ENST00000463511 KCNE4Q8WWG9 221 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 KLF6Q99612 283 aaPredicted RBP23.57■■□□□ 1.36
SSNA1-203ENST00000463511 ASCL3Q9NQ33 180 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 TMEM51Q9NW97 253 aa23.57■■□□□ 1.36
SSNA1-203ENST00000463511 TENM4Q6N022 2769 aa23.56■■□□□ 1.36
SSNA1-203ENST00000463511 CPED1A4D0V7 1026 aa23.56■■□□□ 1.36
SSNA1-203ENST00000463511 ERVH48-1M5A8F1 160 aa23.56■■□□□ 1.36
SSNA1-203ENST00000463511 FPGTO14772 594 aa23.56■■□□□ 1.36
SSNA1-203ENST00000463511 SPINT1O43278 529 aa23.56■■□□□ 1.36
SSNA1-203ENST00000463511 AQP9O43315 295 aa23.56■■□□□ 1.36
SSNA1-203ENST00000463511 CD160O95971 181 aa23.56■■□□□ 1.36
SSNA1-203ENST00000463511 UNGP13051 313 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms