RNA–Protein interactions for RNA: ENST00000463330.5

BCCIP-204, Transcript of BRCA2 and CDKN1A interacting protein, human

TSL 3

Gene BCCIP, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCCIP-204	ENST00000463330	GARS	P41250	739 aa	Known RBP	3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	RPL7A	P62424	266 aa	Known RBP	3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	GHRHR	Q02643	423 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	FHL1	Q13642	323 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	WTAP	Q15007	396 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	RPE65	Q16518	533 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	ME3	Q16798	604 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330		Q4G0T1	1027 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	DUSP28	Q4G0W2	176 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	GLE1	Q53GS7	698 aa	Known RBP	3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	ARMC3	Q5W041	872 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	AADACL2	Q6P093	401 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	CDC73	Q6P1J9	531 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	PDXDC1	Q6P996	788 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	SHC4	Q6S5L8	630 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	RBM44	Q6ZP01	1051 aa	Known RBP	3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	CLEC17A	Q6ZS10	378 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	SZRD1	Q7Z422	152 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	TADA2B	Q86TJ2	420 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	TRIM74	Q86UV6	250 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	TRIM73	Q86UV7	250 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	FAM160B2	Q86V87	743 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	TMTC2	Q8N394	836 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	C9orf106	Q8NAJ2	232 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	TMEM116	Q8NCL8	245 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	SNRNP27	Q8WVK2	155 aa	Known RBP	3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	ATP8A2	Q9NTI2	1148 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	HCFC1R1	Q9NWW0	138 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	NKIRAS2	Q9NYR9	191 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	KIAA1456	Q9P272	454 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	LIMA1	Q9UHB6	759 aa	Known RBP	3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	DHDH	Q9UQ10	334 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	ADAM18	Q9Y3Q7	739 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330	LYVE1	Q9Y5Y7	322 aa		3.57	□□□□□ -1.84
BCCIP-204	ENST00000463330		A0A1W2PQF6	199 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	FRMD3	A2A2Y4	597 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	MYMK	A6NI61	221 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	P4HA2	O15460	535 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	PLOD3	O60568	738 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	SEC14L2	O76054	403 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	PGM3	O95394	542 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	PLAU	P00749	431 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	SERPINC1	P01008	464 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	IL1A	P01583	271 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	EIF2S1	P05198	315 aa	Known RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	ADRB2	P07550	413 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	SCP2	P22307	547 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	TTK	P33981	857 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	SKIV2L2	P42285	1042 aa	Known RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	CYP2J2	P51589	502 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	RARS	P54136	660 aa	Known RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	EIF3B	P55884	814 aa	Known RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	OLR1	P78380	273 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	IFI35	P80217	286 aa	Predicted RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	FRG1	Q14331	258 aa	Known RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	BECN1	Q14457	450 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	IRF3	Q14653	427 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	PGM5	Q15124	567 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	PLK5	Q496M5	336 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	C5orf22	Q49AR2	442 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	KIAA1755	Q5JYT7	1200 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	LCE1A	Q5T7P2	110 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	MFSD4B	Q5TF39	518 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	FAM171A1	Q5VUB5	890 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	ZNF280D	Q6N043	979 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	TMCO3	Q6UWJ1	677 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	IL20RB	Q6UXL0	311 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	RRM2B	Q7LG56	351 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	SLC46A3	Q7Z3Q1	461 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	MRPL10	Q7Z7H8	261 aa	Known RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	GPAT4	Q86UL3	456 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	C17orf53	Q8N3J3	647 aa	Predicted RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	SRBD1	Q8N5C6	995 aa	Known RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	FRMD1	Q8N878	549 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	OSR1	Q8TAX0	266 aa	Predicted RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	GDPD5	Q8WTR4	605 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	ZFPM2	Q8WW38	1151 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	PABPC5	Q96DU9	382 aa	Known RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	FAM120B	Q96EK7	910 aa	Known RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	CMTM3	Q96MX0	182 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	TMEM79	Q9BSE2	394 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	NUF2	Q9BZD4	464 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	HIPK3	Q9H422	1215 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	PLEKHB1	Q9UF11	243 aa	Predicted RBP	3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	RPS6KA6	Q9UK32	745 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	TNFSF13B	Q9Y275	285 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	TTLL3	Q9Y4R7	772 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	PCDHGB5	Q9Y5G0	923 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	CLDN16	Q9Y5I7	305 aa		3.56	□□□□□ -1.84
BCCIP-204	ENST00000463330	EIF4G1	Q04637	1599 aa	Known RBP	3.55	□□□□□ -1.84
BCCIP-204	ENST00000463330		A0A1W2PQ09	198 aa		3.55	□□□□□ -1.84
BCCIP-204	ENST00000463330	DDTL	A6NHG4	134 aa	Predicted RBP	3.55	□□□□□ -1.84
BCCIP-204	ENST00000463330		B4DLN1	442 aa		3.55	□□□□□ -1.84
BCCIP-204	ENST00000463330	SOCS2	O14508	198 aa		3.55	□□□□□ -1.84
BCCIP-204	ENST00000463330	MSI1	O43347	362 aa	Known RBP	3.55	□□□□□ -1.84
BCCIP-204	ENST00000463330	HNRNPCL1	O60812	293 aa	Known RBP	3.55	□□□□□ -1.84
BCCIP-204	ENST00000463330	BEST1	O76090	585 aa		3.55	□□□□□ -1.84
BCCIP-204	ENST00000463330	OR2C1	O95371	312 aa		3.55	□□□□□ -1.84
BCCIP-204	ENST00000463330	NFATC1	O95644	943 aa		3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms