RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 TMCO4Q5TGY1 634 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 STPG1Q5TH74 334 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 NEK5Q6P3R8 708 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 GDPD4Q6W3E5 623 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 TRIM69Q86WT6 500 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 LRRC49Q8IUZ0 686 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 ATPAF2Q8N5M1 289 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 KLHL32Q96NJ5 620 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 PSKH2Q96QS6 385 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 CINPQ9BW66 212 aaPredicted RBP16.06■□□□□ 0.16
ERCC3-206ENST00000462306 TM9SF3Q9HD45 589 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 DDX56Q9NY93 547 aaKnown RBP16.06■□□□□ 0.16
ERCC3-206ENST00000462306 TPX2Q9ULW0 747 aaKnown RBP16.06■□□□□ 0.16
ERCC3-206ENST00000462306 CACNA1EQ15878 2313 aa16.06■□□□□ 0.16
ERCC3-206ENST00000462306 ARHGAP33O14559 1287 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 SLC30A4O14863 429 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 PSTPIP1O43586 416 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 SDHBP21912 280 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 GARSP41250 739 aaKnown RBP16.05■□□□□ 0.16
ERCC3-206ENST00000462306 ABL2P42684 1182 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 ID4P47928 161 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 BNC1Q01954 994 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 GBE1Q04446 702 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 SLC9A4Q6AI14 798 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 FBXL19Q6PCT2 694 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 MFSD7Q6UXD7 560 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 SRLQ86TD4 932 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 PLD5Q8N7P1 536 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 RNF25Q96BH1 459 aaPredicted RBP16.05■□□□□ 0.16
ERCC3-206ENST00000462306 CALR3Q96L12 384 aaKnown RBP16.05■□□□□ 0.16
ERCC3-206ENST00000462306 NSMCE3Q96MG7 304 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 DESI2Q9BSY9 194 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 DKK3Q9UBP4 350 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 SEPT3Q9UH03 358 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 CDV3Q9UKY7 258 aaKnown RBP16.05■□□□□ 0.16
ERCC3-206ENST00000462306 FADS3Q9Y5Q0 445 aa16.05■□□□□ 0.16
ERCC3-206ENST00000462306 LAMA1P25391 3075 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 A0A0U1RQJ8 604 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 C4orf47A7E2U8 309 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 WNT9AO14904 365 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 SPINT1O43278 529 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 AP1G1O43747 822 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 RNGTTO60942 597 aaKnown RBP16.04■□□□□ 0.16
ERCC3-206ENST00000462306 GJB3O75712 270 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 MAP3K6O95382 1288 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 PIGNO95427 931 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 MAT2AP31153 395 aaKnown RBP16.04■□□□□ 0.16
ERCC3-206ENST00000462306 MARCKSL1P49006 195 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 CSNK1EP49674 416 aaKnown RBP16.04■□□□□ 0.16
ERCC3-206ENST00000462306 RENBPP51606 427 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 AFF3P51826 1226 aaKnown RBP16.04■□□□□ 0.16
ERCC3-206ENST00000462306 RACK1P63244 317 aaKnown RBP16.04■□□□□ 0.16
ERCC3-206ENST00000462306 GRM3Q14832 879 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 TAZQ16635 292 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 DAAM2Q86T65 1068 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 KIAA1328Q86T90 577 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 HORMAD1Q86X24 394 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 PGBD5Q8N414 524 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 RAB7BQ96AH8 199 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 SLC6A18Q96N87 628 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 TSGA13Q96PP4 275 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 TUBGCP5Q96RT8 1024 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 TMEM9BQ9NQ34 198 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 DTLQ9NZJ0 730 aa16.04■□□□□ 0.16
ERCC3-206ENST00000462306 ZFR2Q9UPR6 939 aaKnown RBP16.04■□□□□ 0.16
ERCC3-206ENST00000462306 PLXNA2O75051 1894 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 A0A1B0GVT2 93 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 A0A1W2PQU0 124 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 TSPAN11A1L157 253 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 TM4SF5O14894 197 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 AREL1O15033 823 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 SYPP08247 313 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 TIMP2P16035 220 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 CR2P20023 1033 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 HSPA9P38646 679 aaKnown RBP16.03■□□□□ 0.16
ERCC3-206ENST00000462306 CDKN2BP42772 138 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 MAPK8P45983 427 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 GRIA4P48058 902 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 GRIK2Q13002 908 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 ZNF235Q14590 738 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 PUM1Q14671 1186 aaKnown RBP eCLIP16.03■□□□□ 0.165e-7■■■■■ 30.6
ERCC3-206ENST00000462306 IFI16Q16666 785 aaKnown RBP16.03■□□□□ 0.16
ERCC3-206ENST00000462306 ZNF284Q2VY69 593 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 TMEM259Q4ZIN3 620 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 LAYNQ6UX15 382 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 PRPF39Q86UA1 669 aaKnown RBP16.03■□□□□ 0.16
ERCC3-206ENST00000462306 CAMK1DQ8IU85 385 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 KATNAL2Q8IYT4 538 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 TEX26Q8N6G2 289 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 LRRC57Q8N9N7 239 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 OR2I1PQ8NGU4 316 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 HCAR2Q8TDS4 363 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 MAML1Q92585 1016 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 KRT35Q92764 455 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 FATE1Q969F0 183 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 ZNF641Q96N77 438 aaPredicted RBP16.03■□□□□ 0.16
ERCC3-206ENST00000462306 RTKNQ9BST9 563 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 SUV39H2Q9H5I1 410 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 GRPEL1Q9HAV7 217 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 TRIM10Q9UDY6 481 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms