RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 GCNT7Q6ZNI0 430 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 OR13H1Q8NG92 308 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 HCAR2Q8TDS4 363 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 FNIP1Q8TF40 1166 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 KLK6Q92876 244 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 ARHGEF26Q96DR7 871 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 BMFQ96LC9 184 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 KLF6Q99612 283 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-207ENST00000461798 EPAS1Q99814 870 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 FUCA2Q9BTY2 467 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 CPEB1Q9BZB8 566 aaKnown RBP9.3□□□□□ -0.92
BRCA1-207ENST00000461798 TTYH3Q9C0H2 523 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 CATSPERBQ9H7T0 1116 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 TAS2R14Q9NYV8 317 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 DKK3Q9UBP4 350 aa9.3□□□□□ -0.92
BRCA1-207ENST00000461798 COL5A1P20908 1838 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-207ENST00000461798 ARID1BQ8NFD5 2236 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-207ENST00000461798 LRRC53A6NM62 1247 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 A6NNZ2 444 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 RASA4BC9J798 803 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 KRIT1O00522 736 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 TRIM38O00635 465 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 SPINT1O43278 529 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 RASA4O43374 803 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 RFPL3O75679 317 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 PIAS2O75928 621 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 TMCC1O94876 653 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 PAK4O96013 591 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-207ENST00000461798 GIMD1P0DJR0 217 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 DESP17661 470 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 DGKAP23743 735 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 ACP1P24666 158 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 GKP32189 559 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 ABL2P42684 1182 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 HCAR3P49019 387 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 ZNF165P49910 485 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 SUOXP51687 545 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 ZNF135P52742 658 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-207ENST00000461798 NDST2P52849 883 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 CLDN2P57739 230 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 FOXK1P85037 733 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 RAD51Q06609 339 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 DNAJC3Q13217 504 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 SGCGQ13326 291 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 CYTH1Q15438 398 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 FIGNQ5HY92 759 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 GDPD4Q6W3E5 623 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 KYAT3Q6YP21 454 aaKnown RBP9.29□□□□□ -0.92
BRCA1-207ENST00000461798 Q6ZSR6 202 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 ZNF571Q7Z3V5 609 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-207ENST00000461798 TMC6Q7Z403 805 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 PSTKQ8IV42 348 aaKnown RBP9.29□□□□□ -0.92
BRCA1-207ENST00000461798 SLC22A18ASQ8N1D0 253 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 ARFGAP1Q8N6T3 406 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 DENND6BQ8NEG7 585 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 OR4C6Q8NH72 309 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 RFFLQ8WZ73 363 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 HMCESQ96FZ2 354 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 GDAP1L1Q96MZ0 367 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 NAP1L5Q96NT1 182 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-207ENST00000461798 NCAPGQ9BPX3 1015 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 TM6SF2Q9BZW4 377 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 KLC2Q9H0B6 622 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 HAUS4Q9H6D7 363 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 ZDHHC6Q9H6R6 413 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 LRRC19Q9H756 370 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 FZD3Q9NPG1 666 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 PLXNB3Q9ULL4 1909 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 FAM208BQ5VWN6 2430 aa9.29□□□□□ -0.92
BRCA1-207ENST00000461798 CHD5Q8TDI0 1954 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 TMEM131Q92545 1883 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 NYNRINQ9P2P1 1898 aaKnown RBP9.28□□□□□ -0.92
BRCA1-207ENST00000461798 SPTY2D1-AS1A0A0U1RR47 76 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 POM121BA6NF01 834 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 IGLON5A6NGN9 336 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 DDX3XO00571 662 aaKnown RBP eCLIP9.28□□□□□ -0.921e-8■■■□□ 17.6
BRCA1-207ENST00000461798 TOR1BO14657 336 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 RAD51BO15315 384 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 SIGLEC6O43699 453 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 CREB3O43889 395 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 IGSF6O95976 241 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 FTLP02792 175 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-207ENST00000461798 CSF2P04141 144 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 UGT2B4P06133 528 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 TIMP2P16035 220 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 PSMA2P25787 234 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 RABIFP47224 123 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 CSNK1DP48730 415 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 PFN3P60673 137 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 E2F1Q01094 437 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 FZD2Q14332 565 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 ASIC2Q16515 512 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 ATXN7L2Q5T6C5 722 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-207ENST00000461798 ERMARDQ5T6L9 678 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 AFMIDQ63HM1 303 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 E4F1Q66K89 784 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-207ENST00000461798 LEKR1Q6ZMV7 388 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 TTC7BQ86TV6 843 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 RYBPQ8N488 228 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-207ENST00000461798 FAM181AQ8N9Y4 354 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms