RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 HYAL3O43820 417 aaPredicted RBP13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PRNPP04156 253 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TNNT1P13805 278 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 VAV1P15498 845 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 SPINK2P20155 84 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CD38P28907 300 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CHRNA3P32297 505 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GRK6P43250 576 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MMRN1Q13201 1228 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CARD16Q5EG05 197 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TMCO4Q5TGY1 634 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 AFMIDQ63HM1 303 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 Q6ZVU0 165 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GLRX5Q86SX6 157 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TMIEQ8NEW7 156 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PIP4K2CQ8TBX8 421 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KIAA1524Q8TCG1 905 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PPP1R16AQ96I34 528 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TSGA10Q9BZW7 698 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KLC2Q9H0B6 622 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 UBA2Q9UBT2 640 aaPredicted RBP13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PPM1HQ9ULR3 514 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TFR2Q9UP52 801 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 FCF1Q9Y324 198 aaKnown RBP13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 REXO2Q9Y3B8 237 aaKnown RBP13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MSRB2Q9Y3D2 182 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CACNA1EQ15878 2313 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PCNX2A6NKB5 2137 aa13.45□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RCCD1A6NED2 376 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PCDHGA12O60330 932 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PRAMEF11O60813 436 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 POP4O95707 220 aaKnown RBP13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CD160O95971 181 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GSRP00390 522 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KRT1P04264 644 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CD48P09326 243 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 FTH1P19P0C7X4 201 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ZFXP17010 805 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 IL4RP24394 825 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CTSKP43235 329 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ARRB1P49407 418 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 FAM193AP78312 1265 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 BNC1Q01954 994 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 IL10RBQ08334 325 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RFTN1Q14699 578 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 STAT4Q14765 748 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 DBX2Q6ZNG2 339 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 SYCE1Q8N0S2 351 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RYBPQ8N488 228 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 OXR1Q8N573 874 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RNF10Q8N5U6 811 aaKnown RBP13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 OR2A12Q8NGT7 310 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 NSMCE1Q8WV22 266 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RAPGEF5Q92565 580 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 LRIG1Q96JA1 1093 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 SLC6A18Q96N87 628 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RNF157Q96PX1 679 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 HEPHQ9BQS7 1158 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 LACRTQ9GZZ8 138 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TNKS2Q9H2K2 1166 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 SP110Q9HB58 689 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GDF3Q9NR23 364 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ETNK2Q9NVF9 386 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 HECAQ9UBI9 543 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 IL36AQ9UHA7 158 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 IPO11Q9UI26 975 aaKnown RBP13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 WASF3Q9UPY6 502 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 DMTF1Q9Y222 760 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 HYOU1Q9Y4L1 999 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 DUSP10Q9Y6W6 482 aa13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 NYNRINQ9P2P1 1898 aaKnown RBP13.44□□□□□ -0.26
RAB11FIP3-207ENST00000461009 C1QTNF9BB2RNN3 333 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KPNA3O00505 521 aaPredicted RBP13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PLRG1O43660 514 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KRT86O43790 486 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CBFA2T3O75081 653 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PALMO75781 387 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TMCC1O94876 653 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ZRANB2O95218 330 aaKnown RBP eCLIP13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TOP3BO95985 862 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 C1QTNF9P0C862 333 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CETN2P41208 172 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RHOAP61586 193 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GRM3Q14832 879 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PAFAH1B3Q15102 231 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 SETMARQ53H47 684 aaPredicted RBP13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 NEK5Q6P3R8 708 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 LEKR1Q6ZMV7 388 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 DPY19L3Q6ZPD9 716 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RAB44Q7Z6P3 723 aaPredicted RBP13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ARHGAP12Q8IWW6 846 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RCOR2Q8IZ40 523 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 BBS5Q8N3I7 341 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CHCHD4Q8N4Q1 142 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 NPWQ8N729 165 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 OR2AP1Q8NGE2 309 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PCDH19Q8TAB3 1148 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 UBE2Q2Q8WVN8 375 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms