RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 STX5Q13190 355 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 TRIM25Q14258 630 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 ESRP1Q6NXG1 681 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 PAOXQ6QHF9 649 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 GPRIN1Q7Z2K8 1008 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 CNTN4Q8IWV2 1026 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 PPHLN1Q8NEY8 458 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 RNF34Q969K3 372 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 MRPL57Q9BQC6 102 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 RBM38Q9H0Z9 239 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 SEMA6AQ9H2E6 1030 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 TRPC7Q9HCX4 862 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 DDX18Q9NVP1 670 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 SUCOQ9UBS9 1254 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 PDCD11Q14690 1871 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 DFFAO00273 331 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 F9P00740 461 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 CAPNS1P04632 268 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 SMPD1P17405 629 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 ZNF135P52742 658 aaPredicted RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 NR1H2P55055 460 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 TAS2R39P59534 338 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 APOFQ13790 326 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 MAPRE2Q15555 327 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 PABPC1LQ4VXU2 614 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 KIAA0319Q5VV43 1072 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 RWDD4Q6NW29 188 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 PTAR1Q7Z6K3 402 aaPredicted RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 EGFL6Q8IUX8 553 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 MFSD6LQ8IWD5 586 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 AFAP1L2Q8N4X5 818 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 PGAP3Q96FM1 320 aaPredicted RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 CRTAC1Q9NQ79 661 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 CNOT11Q9UKZ1 510 aaKnown RBP12.23□□□□□ -0.45
GCOM1-203ENST00000460962 PCDHGA7Q9Y5G6 932 aa12.23□□□□□ -0.45
GCOM1-203ENST00000460962 NEMP2A6NFY4 417 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 E7ENX8 843 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 PENKP01210 267 aaPredicted RBP12.22□□□□□ -0.45
GCOM1-203ENST00000460962 ATP5F1P24539 256 aaPredicted RBP12.22□□□□□ -0.45
GCOM1-203ENST00000460962 SLC1A2P43004 574 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 CYTH1Q15438 398 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 MGAT5BQ3V5L5 792 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 XKR4Q5GH76 650 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 CNSTQ6PJW8 725 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 AMIGO2Q86SJ2 522 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 FAM35AQ86V20 835 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 HEXDCQ8WVB3 486 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 TMEM40Q8WWA1 233 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 SMOQ99835 787 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 FICDQ9BVA6 458 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 SENP6Q9GZR1 1112 aaPredicted RBP12.22□□□□□ -0.45
GCOM1-203ENST00000460962 PCDHAC1Q9H158 963 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 UNC93B1Q9H1C4 597 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 TRPV6Q9H1D0 765 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 CHST12Q9NRB3 414 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 RRN3Q9NYV6 651 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 ANXA9O76027 345 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 CSPG5O95196 566 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 SNAI1O95863 264 aaPredicted RBP12.22□□□□□ -0.45
GCOM1-203ENST00000460962 ZNF26P17031 533 aaPredicted RBP12.22□□□□□ -0.45
GCOM1-203ENST00000460962 CD151P48509 253 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 ADRM1Q16186 407 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 USP41Q3LFD5 358 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 DUSP28Q4G0W2 176 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 ZNF470Q6ECI4 717 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 PELI3Q8N2H9 469 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 GPRC5AQ8NFJ5 357 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 TSPAN18Q96SJ8 248 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 KATNBL1Q9H079 304 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 CYP4F12Q9HCS2 524 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 MRGBPQ9NV56 204 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 THEGQ9P2T0 379 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 IPPQ9Y573 584 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 A0A087X1B8 175 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 ARHGEF37A1IGU5 675 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 GABRDO14764 452 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 RANBP1P43487 201 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 SULT2A1Q06520 285 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 FASTKQ14296 549 aaKnown RBP12.22□□□□□ -0.45
GCOM1-203ENST00000460962 CSHL1Q14406 222 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 SNX17Q15036 470 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 AGKQ53H12 422 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 ATPAF2Q8N5M1 289 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 DNAJB3Q8WWF6 145 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 DPF3Q92784 378 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 FAR2Q96K12 515 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 SLC2A11Q9BYW1 496 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 COQ10BQ9H8M1 238 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 CACNA2D2Q9NY47 1150 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 CCDC167Q9P0B6 97 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 SLC2A6Q9UGQ3 507 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 PHF24Q9UPV7 400 aa12.22□□□□□ -0.45
GCOM1-203ENST00000460962 SMIM35A0A1B0GVV1 85 aa12.21□□□□□ -0.45
GCOM1-203ENST00000460962 HEATR9A2RTY3 570 aa12.21□□□□□ -0.45
GCOM1-203ENST00000460962 PSMD12O00232 456 aaPredicted RBP12.21□□□□□ -0.45
GCOM1-203ENST00000460962 UBDO15205 165 aa12.21□□□□□ -0.45
GCOM1-203ENST00000460962 GPC4O75487 556 aa12.21□□□□□ -0.45
GCOM1-203ENST00000460962 SMIM10L2AP0DMW4 78 aa12.21□□□□□ -0.45
GCOM1-203ENST00000460962 SMIM10L2BP0DMW5 78 aa12.21□□□□□ -0.45
GCOM1-203ENST00000460962 PAMP19021 973 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms