RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 EML5Q05BV3 1969 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 KRIT1O00522 736 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 MID1O15344 667 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 LEFTY1O75610 366 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 CTSLP07711 333 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 KCNA4P22459 653 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 OTUD4Q01804 1114 aaKnown RBP22.76■■□□□ 1.23
C9orf3-209ENST00000460573 PRKD1Q15139 912 aaPredicted RBP22.76■■□□□ 1.23
C9orf3-209ENST00000460573 ARSIQ5FYB1 569 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 SLC36A4Q6YBV0 504 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 SRLQ86TD4 932 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 ZC3H18Q86VM9 953 aaKnown RBP22.76■■□□□ 1.23
C9orf3-209ENST00000460573 ACTL9Q8TC94 416 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 MAIP1Q8WWC4 291 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 HAUS1Q96CS2 278 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 PBKQ96KB5 322 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 OMDQ99983 421 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 FERMT1Q9BQL6 677 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 MGME1Q9BQP7 344 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 DYRK4Q9NR20 520 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 RBM22Q9NW64 420 aaKnown RBP eCLIP22.76■■□□□ 1.23
C9orf3-209ENST00000460573 EVLQ9UI08 416 aaPredicted RBP22.76■■□□□ 1.23
C9orf3-209ENST00000460573 SARDHQ9UL12 918 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 FZD4Q9ULV1 537 aa22.76■■□□□ 1.23
C9orf3-209ENST00000460573 ENC1O14682 589 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 GNG11P61952 73 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 AP1S1P61966 158 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 CACUL1Q86Y37 369 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 SLC13A5Q86YT5 568 aaPredicted RBP22.75■■□□□ 1.23
C9orf3-209ENST00000460573 GRIN3AQ8TCU5 1115 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 HCAR2Q8TDS4 363 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 GANCQ8TET4 914 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 EXOC2Q96KP1 924 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 NUDCD1Q96RS6 583 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 IL12RB2Q99665 862 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 FRMD8P1Q9BZ68 369 aaPredicted RBP22.75■■□□□ 1.23
C9orf3-209ENST00000460573 POLR1EQ9GZS1 481 aaKnown RBP22.75■■□□□ 1.23
C9orf3-209ENST00000460573 FBXL12Q9NXK8 326 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 CYP8B1Q9UNU6 501 aa22.75■■□□□ 1.23
C9orf3-209ENST00000460573 IGHV1OR15-9A0A0B4J2B8 117 aa22.74■■□□□ 1.23
C9orf3-209ENST00000460573 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.74■■□□□ 1.23
C9orf3-209ENST00000460573 KPNA3O00505 521 aaPredicted RBP22.74■■□□□ 1.23
C9orf3-209ENST00000460573 CD6P30203 668 aa22.74■■□□□ 1.23
C9orf3-209ENST00000460573 SCNN1BP51168 640 aa22.74■■□□□ 1.23
C9orf3-209ENST00000460573 EIF3EP60228 445 aaKnown RBP22.74■■□□□ 1.23
C9orf3-209ENST00000460573 CCDC6Q16204 474 aa22.74■■□□□ 1.23
C9orf3-209ENST00000460573 SLC45A4Q5BKX6 768 aa22.74■■□□□ 1.23
C9orf3-209ENST00000460573 ALG1LQ6GMV1 187 aa22.74■■□□□ 1.23
C9orf3-209ENST00000460573 RLN3Q8WXF3 142 aa22.74■■□□□ 1.23
C9orf3-209ENST00000460573 ZNF641Q96N77 438 aaPredicted RBP22.74■■□□□ 1.23
C9orf3-209ENST00000460573 QKIQ96PU8 341 aaKnown RBP eCLIP22.74■■□□□ 1.232e-7■■■■□ 20.9
C9orf3-209ENST00000460573 VAT1Q99536 393 aa22.74■■□□□ 1.23
C9orf3-209ENST00000460573 SGK2Q9HBY8 427 aa22.74■■□□□ 1.23
C9orf3-209ENST00000460573 NT5MQ9NPB1 228 aa22.74■■□□□ 1.23
C9orf3-209ENST00000460573 A0A1W2PP55 124 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 H7C0C1 242 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 KCNK1O00180 336 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 MUSKO15146 869 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 SLC7A4O43246 635 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 RNASEH2AO75792 299 aaKnown RBP22.73■■□□□ 1.23
C9orf3-209ENST00000460573 EPN2O95208 641 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 JCHAINP01591 159 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 CR2P20023 1033 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 TGM1P22735 817 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 ITGB7P26010 798 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 RGRP47804 291 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 ATP5OP48047 213 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 ZNF805Q5CZA5 627 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 SPDYCQ5MJ68 293 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 GDPD4Q6W3E5 623 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 CDKL3Q8IVW4 592 aaPredicted RBP22.73■■□□□ 1.23
C9orf3-209ENST00000460573 PGBD5Q8N414 524 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 HDDC3Q8N4P3 179 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 AADATQ8N5Z0 425 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 OR6K2Q8NGY2 324 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 LRRN4Q8WUT4 740 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 FAM131CQ96AQ9 280 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 HDAC8Q9BY41 377 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 BTBD1Q9H0C5 482 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 ATP13A3Q9H7F0 1226 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 SCUBE2Q9NQ36 999 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 WSB2Q9NYS7 404 aaPredicted RBP22.73■■□□□ 1.23
C9orf3-209ENST00000460573 INVSQ9Y283 1065 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 ATP8A1Q9Y2Q0 1164 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 CEP250Q9BV73 2442 aa22.73■■□□□ 1.23
C9orf3-209ENST00000460573 CES2O00748 559 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 MAP3K13O43283 966 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 CEP104O60308 925 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 ATP1A1P05023 1023 aaKnown RBP22.72■■□□□ 1.23
C9orf3-209ENST00000460573 RBP3P10745 1247 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 SERPINA4P29622 427 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 DRD3P35462 400 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 CREB5Q02930 508 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 ITKQ08881 620 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 PLK5Q496M5 336 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 TEX44Q53QW1 395 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 HTR3CQ8WXA8 447 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 ZC3H10Q96K80 434 aaKnown RBP22.72■■□□□ 1.23
C9orf3-209ENST00000460573 SUV39H2Q9H5I1 410 aa22.72■■□□□ 1.23
C9orf3-209ENST00000460573 SEPT10Q9P0V9 454 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms