RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 LHX9Q9NQ69 397 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 INCENPQ9NQS7 918 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 PAK6Q9NQU5 681 aaPredicted RBP-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 SLC7A10Q9NS82 523 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 UQCC1Q9NVA1 299 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 THAP1Q9NVV9 213 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 DNAJB12Q9NXW2 375 aaKnown RBP-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 DNAJC5BQ9UF47 199 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 CPA4Q9UI42 421 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 ZFP69BQ9UJL9 534 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 KLK9Q9UKQ9 250 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 NUP50Q9UKX7 468 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 TMPRSS11EQ9UL52 423 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 FZD4Q9ULV1 537 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 SLC45A2Q9UMX9 530 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 SATB2Q9UPW6 733 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 EXO1Q9UQ84 846 aaKnown RBP-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 SNX11Q9Y5W9 270 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 FPGT-TNNI3KV9GXZ4 949 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 RNF17Q9BXT8 1623 aaKnown RBP-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 OBSL1O75147 1896 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 PTPRSQ13332 1948 aa-1.93□□□□□ -2.72
SNORD54-201ENST00000459159 TAF1LQ8IZX4 1826 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CDC42BPBQ9Y5S2 1711 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 SCN1AP35498 2009 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 TBC1D3DA0A087WVF3 549 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 TBC1D3IA0A087WXS9 549 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 TEX51A0A1B0GUA7 166 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 A0A1B0GVM2 712 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 A0A1W2PR77 199 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 MBLAC1A4D2B0 266 aaPredicted RBP-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CDHR4A6H8M9 788 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 VWA3AA6NCI4 1184 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 TRABD2BA6NFA1 517 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CCT8L1PA6NM43 557 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 GSG1L2A8MUP6 293 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 USP17L10C9JJH3 530 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 E9PSI1 815 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 QSOX1O00391 747 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 NR5A2O00482 541 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 TPP1O14773 563 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 GAS2O43903 313 aaKnown RBP-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 GATBO75879 557 aaKnown RBP-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CST7O76096 145 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 SLCO2B1O94956 709 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 FGF19O95750 216 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 MLYCDO95822 493 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 TBX18O95935 607 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 IGKV1-17P01599 117 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 IGKV1-16P04430 117 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 HPNP05981 417 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 MMP2P08253 660 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CD63P08962 238 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 RAB40ALP0C0E4 278 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 TBC1D3HP0C7X1 549 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 POU2F1P14859 743 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 GSPT1P15170 499 aaKnown RBP-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 SLC25A16P16260 332 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 ZSCAN20P17040 1043 aaPredicted RBP-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 BGNP21810 368 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 LHCGRP22888 699 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 PTPN3P26045 913 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CD34P28906 385 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 AVPR1AP37288 418 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 RFC3P40938 356 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CDKN2AP42771 156 aaKnown RBP-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 PTPN9P43378 593 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 GCGRP47871 477 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 EMDP50402 254 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 ZNF81P51508 661 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 PRLHP81277 87 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 ADORA2A-AS1P86434 159 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CDK17Q00537 523 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CHRNEQ04844 493 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 PPIGQ13427 754 aaKnown RBP eCLIP-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 SPIDRQ14159 915 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 MPP2Q14168 576 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 MORF4L2Q15014 288 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 ZNF146Q15072 292 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 PDIA6Q15084 440 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 NFKBIBQ15653 356 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 DGKDQ16760 1214 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 PUS10Q3MIT2 529 aaKnown RBP-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CFAP100Q494V2 611 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 GPAT3Q53EU6 434 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 RNF220Q5VTB9 566 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 TBC1D3GQ6DHY5 549 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 ALKBH2Q6NS38 261 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 MTFR2Q6P444 385 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 USP17L2Q6R6M4 530 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 IGFL1Q6UW32 110 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 DEF8Q6ZN54 512 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 C17orf107Q6ZR85 190 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 GET4Q7L5D6 327 aaPredicted RBP-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 FASTKD5Q7L8L6 764 aaKnown RBP-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CHST3Q7LGC8 479 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 RPAINQ86UA6 219 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 AMIGO1Q86WK6 493 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 GPBP1Q86WP2 473 aa-1.94□□□□□ -2.72
SNORD54-201ENST00000459159 CCNJLQ8IV13 435 aa-1.94□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms