RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 TBC1D3DA0A087WVF3 549 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TBC1D3IA0A087WXS9 549 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TBC1D3EA0A087X179 549 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TBC1D3KA0A087X1G2 549 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 A0A1B0GTW7 788 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 A0A1W2PPC4 97 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 LNP1A1A4G5 178 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TSPAN11A1L157 253 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 CCDC66A2RUB6 948 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 GRID2IPA4D2P6 1211 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TBC1D3FA6NER0 549 aaPredicted RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 FAM47DPA6NHR8 397 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 C16orf96A6NNT2 1141 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 PATE3B3GLJ2 98 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TBC1D3LB9A6J9 549 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 RNF103O00237 685 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 PLK4O00444 970 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 APOL1O14791 398 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 AP1G1O43747 822 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 KRT86O43790 486 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 FSBPO95073 299 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 ZRANB2O95218 330 aaKnown RBP eCLIP8.61□□□□□ -1.03
SP140-207ENST00000456542 UGT2B4P06133 528 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TBC1D3HP0C7X1 549 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TNNT1P13805 278 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 ADRB3P13945 408 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 CCNCP24863 283 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 CTNNA2P26232 953 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 CDKN2BP42772 138 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 SUOXP51687 545 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 LIMK1P53667 647 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 NAP1L1P55209 391 aaKnown RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 TAS2R38P59533 333 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 AP1S1P61966 158 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 GBE1Q04446 702 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 SLC10A7Q0GE19 358 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 HNRNPDQ14103 355 aaKnown RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 TFDP2Q14188 446 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 ZNF235Q14590 738 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 SF3A2Q15428 464 aaKnown RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 CCDC6Q16204 474 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 POM121L1PQ3SYA9 428 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TFDP3Q5H9I0 405 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TBC1D3GQ6DHY5 549 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TBC1D3CQ6IPX1 549 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TCEAL6Q6IPX3 200 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 FBXL19Q6PCT2 694 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 MFSD7Q6UXD7 560 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 GDPD4Q6W3E5 623 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 SPOCD1Q6ZMY3 1216 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 PARS2Q7L3T8 475 aaKnown RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 RCOR2Q8IZ40 523 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TBC1D3Q8IZP1 549 aaPredicted RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 SYCE1Q8N0S2 351 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 RNF10Q8N5U6 811 aaKnown RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 NETO2Q8NC67 525 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TSEN2Q8NCE0 465 aaKnown RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 EXD1Q8NHP7 514 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 NETO1Q8TDF5 533 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 UBE2Q2Q8WVN8 375 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 SNX19Q92543 992 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 MAML1Q92585 1016 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 TCEAL3Q969E4 200 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 RNF25Q96BH1 459 aaPredicted RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 HDAC11Q96DB2 347 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 EXOC2Q96KP1 924 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 ZNF641Q96N77 438 aaPredicted RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 ZNF830Q96NB3 372 aaPredicted RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 DCBLD2Q96PD2 775 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 MGME1Q9BQP7 344 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 ORAI3Q9BRQ5 295 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 MAK16Q9BXY0 300 aaKnown RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 TSGA10Q9BZW7 698 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 BRD8Q9H0E9 1235 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 SMOC1Q9H4F8 434 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 CAPN10Q9HC96 672 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 HAUS2Q9NVX0 235 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 DTLQ9NZJ0 730 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 AMACRQ9UHK6 382 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 PCDHA3Q9Y5H8 950 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 LRRK1Q38SD2 2015 aa8.61□□□□□ -1.03
SP140-207ENST00000456542 ASCC3Q8N3C0 2202 aaKnown RBP8.61□□□□□ -1.03
SP140-207ENST00000456542 ZNF292O60281 2723 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 TMEM131Q92545 1883 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 hCG_1818297A0A087WSY0 165 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 MACROD2A1Z1Q3 448 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 MIF4GDA9UHW6 222 aaKnown RBP8.6□□□□□ -1.03
SP140-207ENST00000456542 MUSKO15146 869 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 MATN3O15232 486 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 BCAT2O15382 392 aaPredicted RBP8.6□□□□□ -1.03
SP140-207ENST00000456542 CFIP05156 583 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 CCDC175P0C221 793 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 CR2P20023 1033 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 SDHBP21912 280 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 TGM2P21980 687 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 MAOBP27338 520 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 SERPINA4P29622 427 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 GKP32189 559 aa8.6□□□□□ -1.03
SP140-207ENST00000456542 MMP13P45452 471 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms