RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PIGHQ14442 188 aaPredicted RBP18.12■□□□□ 0.49
MSH6-207ENST00000456246 PRAMEF14Q5SWL7 426 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 SEL1L3Q68CR1 1132 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 SLCO6A1Q86UG4 719 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 GATAD2AQ86YP4 633 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 GALNT15Q8N3T1 639 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 LZTR1Q8N653 840 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 ARFGAP1Q8N6T3 406 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 PNPLA1Q8N8W4 532 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 DENND6BQ8NEG7 585 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 SLC17A9Q9BYT1 436 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 CPEB1Q9BZB8 566 aaKnown RBP18.12■□□□□ 0.49
MSH6-207ENST00000456246 ZWILCHQ9H900 591 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 KLHL11Q9NVR0 708 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 GPATCH2LQ9NWQ4 482 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 MYO1AQ9UBC5 1043 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 DKK3Q9UBP4 350 aa18.12■□□□□ 0.49
MSH6-207ENST00000456246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.12■□□□□ 0.494e-12■■■■□ 20.6
MSH6-207ENST00000456246 PRAMEF11O60813 436 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
MSH6-207ENST00000456246 BOLA3Q53S33 107 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 PPP6R3Q5H9R7 873 aaPredicted RBP18.11■□□□□ 0.49
MSH6-207ENST00000456246 ATXN7L2Q5T6C5 722 aaPredicted RBP18.11■□□□□ 0.49
MSH6-207ENST00000456246 KYAT3Q6YP21 454 aaKnown RBP18.11■□□□□ 0.49
MSH6-207ENST00000456246 LEKR1Q6ZMV7 388 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 GCNT7Q6ZNI0 430 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 DNAAF5Q86Y56 855 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 HCAR2Q8TDS4 363 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 KLK6Q92876 244 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 KLHL32Q96NJ5 620 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 LENG8Q96PV6 779 aaPredicted RBP18.11■□□□□ 0.49
MSH6-207ENST00000456246 PEBP4Q96S96 227 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 KCTD15Q96SI1 283 aaPredicted RBP18.11■□□□□ 0.49
MSH6-207ENST00000456246 MYOCQ99972 504 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 TRIM7Q9C029 511 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 KLC2Q9H0B6 622 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 PDFQ9HBH1 243 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 IFNKQ9P0W0 207 aa18.11■□□□□ 0.49
MSH6-207ENST00000456246 FRYQ5TBA9 3013 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 H3BRJ5 948 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 ENC1O14682 589 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 AREL1O15033 823 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 LDOC1O95751 146 aaPredicted RBP18.1■□□□□ 0.49
MSH6-207ENST00000456246 GYPCP04921 128 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 C1SP09871 688 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 ERCC2P18074 760 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 GKP32189 559 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 ARL4AP40617 200 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 ABL2P42684 1182 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 RFTN1Q14699 578 aaPredicted RBP18.1■□□□□ 0.49
MSH6-207ENST00000456246 DPYSL2Q16555 572 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 CA9Q16790 459 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 CYP4V2Q6ZWL3 525 aaPredicted RBP18.1■□□□□ 0.49
MSH6-207ENST00000456246 TMPRSS7Q7RTY8 843 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 NIPA2Q8N8Q9 360 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 OR13H1Q8NG92 308 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 CNDP2Q96KP4 475 aaKnown RBP18.1■□□□□ 0.49
MSH6-207ENST00000456246 C1QTNF7Q9BXJ2 289 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 C1QTNF2Q9BXJ5 285 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 CALN1Q9BXU9 219 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 FZD3Q9NPG1 666 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 LHX3Q9UBR4 397 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 IP6K2Q9UHH9 426 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 CA5BQ9Y2D0 317 aa18.1■□□□□ 0.49
MSH6-207ENST00000456246 FPGTO14772 594 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 CBFA2T2O43439 604 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 RABIFP47224 123 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 TRIM14Q14142 442 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 HS1BP3Q53T59 392 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 AFMIDQ63HM1 303 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 CCNI2Q6ZMN8 369 aaPredicted RBP18.09■□□□□ 0.49
MSH6-207ENST00000456246 KANSL1Q7Z3B3 1105 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 TTC7BQ86TV6 843 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 EID2Q8N6I1 236 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 CPLX3Q8WVH0 158 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 TEKT4Q8WW24 435 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 VOPP1Q96AW1 172 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 CELF6Q96J87 481 aaKnown RBP18.09■□□□□ 0.49
MSH6-207ENST00000456246 ZNF641Q96N77 438 aaPredicted RBP18.09■□□□□ 0.49
MSH6-207ENST00000456246 TUBGCP5Q96RT8 1024 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 SP110Q9HB58 689 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 GPR27Q9NS67 375 aa18.09■□□□□ 0.49
MSH6-207ENST00000456246 GOLGA8CPA6NN73 597 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 TOR1BO14657 336 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 PAK4O96013 591 aaPredicted RBP18.08■□□□□ 0.48
MSH6-207ENST00000456246 XPAP23025 273 aaPredicted RBP18.08■□□□□ 0.48
MSH6-207ENST00000456246 HNRNPH3P31942 346 aaKnown RBP18.08■□□□□ 0.48
MSH6-207ENST00000456246 CSNK1DP48730 415 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 PAPOLAP51003 745 aaKnown RBP18.08■□□□□ 0.48
MSH6-207ENST00000456246 ELP6Q0PNE2 266 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 BNIP3Q12983 259 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 ILKQ13418 452 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 DPYSQ14117 519 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 FGL2Q14314 439 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 CYTH1Q15438 398 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 NFKBIBQ15653 356 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 CFAP58Q5T655 872 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 TMCO4Q5TGY1 634 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 ALKBH5Q6P6C2 394 aaKnown RBP18.08■□□□□ 0.48
MSH6-207ENST00000456246 Q6ZSR6 202 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms