RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 TBC1D3Q8IZP1 549 aaPredicted RBP17.59■□□□□ 0.41
USP39-208ENST00000455732 RYBPQ8N488 228 aaPredicted RBP17.59■□□□□ 0.41
USP39-208ENST00000455732 FAF2Q96CS3 445 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 ZNF599Q96NL3 588 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 SLC32A1Q9H598 525 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 GAREM1Q9H706 876 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 LUC7LQ9NQ29 371 aaKnown RBP17.59■□□□□ 0.41
USP39-208ENST00000455732 IPO11Q9UI26 975 aaKnown RBP17.59■□□□□ 0.41
USP39-208ENST00000455732 ANKRD6Q9Y2G4 727 aa17.59■□□□□ 0.41
USP39-208ENST00000455732 FNDC3AQ9Y2H6 1198 aaKnown RBP17.59■□□□□ 0.41
USP39-208ENST00000455732 A0A0A6YYK5 440 aaPredicted RBP17.58■□□□□ 0.4
USP39-208ENST00000455732 ZNF487B1APH4 448 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 KRIT1O00522 736 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 AP1G1O43747 822 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 KRT37O76014 449 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 CER1O95813 267 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 ADRB3P13945 408 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 GKP32189 559 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 SLC1A1P43005 524 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 RAD51Q06609 339 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 SPA17Q15506 151 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 ATP13A4Q4VNC1 1196 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 ZNF805Q5CZA5 627 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 LRRC38Q5VT99 294 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 ARHGAP36Q6ZRI8 547 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 PARS2Q7L3T8 475 aaKnown RBP17.58■□□□□ 0.4
USP39-208ENST00000455732 VSIG1Q86XK7 387 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 OR6K2Q8NGY2 324 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 RAB7BQ96AH8 199 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 SLC6A18Q96N87 628 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 CPEB1Q9BZB8 566 aaKnown RBP17.58■□□□□ 0.4
USP39-208ENST00000455732 SP110Q9HB58 689 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 IMPACTQ9P2X3 320 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 DMTF1Q9Y222 760 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 PCDHA13Q9Y5I0 950 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 SNX11Q9Y5W9 270 aa17.58■□□□□ 0.4
USP39-208ENST00000455732 SOWAHDA6NJG2 315 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 TMEM110-MUSTN1A8MSY1 372 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 WNT9AO14904 365 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 VILLO15195 856 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 SH3BP5O60239 455 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 PALMO75781 387 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 NDUFA10O95299 355 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 GJC1P36383 396 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 CSNK1DP48730 415 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 SHC2P98077 582 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 MMRN1Q13201 1228 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 GRM3Q14832 879 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 PAFAH1B3Q15102 231 aaKnown RBP17.57■□□□□ 0.4
USP39-208ENST00000455732 TMCO4Q5TGY1 634 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 DBX2Q6ZNG2 339 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 PRPF39Q86UA1 669 aaKnown RBP17.57■□□□□ 0.4
USP39-208ENST00000455732 ZSCAN30Q86W11 494 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 LRRC49Q8IUZ0 686 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 TP53INP2Q8IXH6 220 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 KCTD6Q8NC69 237 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 CALN1Q9BXU9 219 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 TM7SF3Q9NS93 570 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 DKK3Q9UBP4 350 aa17.57■□□□□ 0.4
USP39-208ENST00000455732 EPN1Q9Y6I3 576 aaPredicted RBP17.57■□□□□ 0.4
USP39-208ENST00000455732 ARID1BQ8NFD5 2236 aaPredicted RBP17.56■□□□□ 0.4
USP39-208ENST00000455732 USP24Q9UPU5 2620 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 ZFHX4Q86UP3 3567 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 A0A1W2PR77 199 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 C16orf96A6NNT2 1141 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 PEX11BO96011 259 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 WNT1P04628 370 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 UGT2B4P06133 528 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 CTSKP43235 329 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 FAM193AP78312 1265 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 SETMARQ53H47 684 aaPredicted RBP17.56■□□□□ 0.4
USP39-208ENST00000455732 ANKRD20A8PQ5CZ79 823 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 NCBP2-AS2Q69YL0 99 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 NAPEPLDQ6IQ20 393 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 FBXL19Q6PCT2 694 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 GDPD4Q6W3E5 623 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 HORMAD1Q86X24 394 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 ATPAF2Q8N5M1 289 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 NETO2Q8NC67 525 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 PCDH19Q8TAB3 1148 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 HCAR2Q8TDS4 363 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 CAMK1GQ96NX5 476 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 PSKH2Q96QS6 385 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 CINPQ9BW66 212 aaPredicted RBP17.56■□□□□ 0.4
USP39-208ENST00000455732 KLHL11Q9NVR0 708 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 SEPT3Q9UH03 358 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 WASF3Q9UPY6 502 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 FADS3Q9Y5Q0 445 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 ANKRD36A6QL64 1941 aa17.56■□□□□ 0.4
USP39-208ENST00000455732 TSPAN11A1L157 253 aa17.55■□□□□ 0.4
USP39-208ENST00000455732 MFSD11O43934 449 aa17.55■□□□□ 0.4
USP39-208ENST00000455732 MAFKO60675 156 aa17.55■□□□□ 0.4
USP39-208ENST00000455732 RNGTTO60942 597 aaKnown RBP17.55■□□□□ 0.4
USP39-208ENST00000455732 CBFA2T3O75081 653 aa17.55■□□□□ 0.4
USP39-208ENST00000455732 IPO7O95373 1038 aaKnown RBP17.55■□□□□ 0.4
USP39-208ENST00000455732 CD38P28907 300 aa17.55■□□□□ 0.4
USP39-208ENST00000455732 HSPA9P38646 679 aaKnown RBP17.55■□□□□ 0.4
USP39-208ENST00000455732 NSUN2Q08J23 767 aaKnown RBP eCLIP17.55■□□□□ 0.4
USP39-208ENST00000455732 HNRNPDQ14103 355 aaKnown RBP17.55■□□□□ 0.4
USP39-208ENST00000455732 ZNF423Q2M1K9 1284 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms