RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 SERPINB12Q96P63 405 aa16.87■□□□□ 0.29
LINC00963-208ENST00000454968 TRIB3Q96RU7 358 aa16.87■□□□□ 0.29
LINC00963-208ENST00000454968 RBM15Q96T37 977 aaKnown RBP eCLIP16.87■□□□□ 0.291e-6■■■■■ 43.4
LINC00963-208ENST00000454968 NOD2Q9HC29 1040 aa16.87■□□□□ 0.29
LINC00963-208ENST00000454968 CASS4Q9NQ75 786 aa16.87■□□□□ 0.29
LINC00963-208ENST00000454968 HEBP1Q9NRV9 189 aa16.87■□□□□ 0.29
LINC00963-208ENST00000454968 GOLGA6AQ9NYA3 693 aa16.87■□□□□ 0.29
LINC00963-208ENST00000454968 PIAS3Q9Y6X2 628 aa16.87■□□□□ 0.29
LINC00963-208ENST00000454968 MYLKQ15746 1914 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 TBC1D3BA6NDS4 549 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 K7EQS6 105 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 EIF3HO15372 352 aaKnown RBP eCLIP16.86■□□□□ 0.29
LINC00963-208ENST00000454968 FZD6O60353 706 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 NEBLO76041 1014 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 SERPINF2P08697 491 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 FAM153BP0C7A2 387 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 C7P10643 843 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 CD86P42081 329 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 KIR2DL1P43626 348 aaPredicted RBP16.86■□□□□ 0.29
LINC00963-208ENST00000454968 WNT3AP56704 352 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 E2F5Q15329 346 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 FAM153CQ494X1 144 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 ARMC3Q5W041 872 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 NAPEPLDQ6IQ20 393 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 DENND5AQ6IQ26 1287 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 NUDT18Q6ZVK8 323 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 SRLQ86TD4 932 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 OR2A12Q8NGT7 310 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 ATXN2LQ8WWM7 1075 aaKnown RBP16.86■□□□□ 0.29
LINC00963-208ENST00000454968 FEM1CQ96JP0 617 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 GDAP1L1Q96MZ0 367 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 CPEB1Q9BZB8 566 aaKnown RBP16.86■□□□□ 0.29
LINC00963-208ENST00000454968 CIPCQ9C0C6 399 aa16.86■□□□□ 0.29
LINC00963-208ENST00000454968 XAB2Q9HCS7 855 aaKnown RBP16.86■□□□□ 0.29
LINC00963-208ENST00000454968 MTRF1LQ9UGC7 380 aaKnown RBP16.86■□□□□ 0.29
LINC00963-208ENST00000454968 ARIH1Q9Y4X5 557 aaPredicted RBP16.86■□□□□ 0.29
LINC00963-208ENST00000454968 E7EVH7 732 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 HTRA2O43464 458 aaPredicted RBP16.85■□□□□ 0.29
LINC00963-208ENST00000454968 IGSF6O95976 241 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 BMP1P13497 986 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 NNMTP40261 264 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 GRIA1P42261 906 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 SCNN1BP51168 640 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 SNRPD1P62314 119 aaKnown RBP16.85■□□□□ 0.29
LINC00963-208ENST00000454968 MSLNQ13421 630 aaPredicted RBP16.85■□□□□ 0.29
LINC00963-208ENST00000454968 ZNF234Q14588 700 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 HNRNPA1L2Q32P51 320 aaKnown RBP16.85■□□□□ 0.29
LINC00963-208ENST00000454968 CARD16Q5EG05 197 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 LINC00523Q86TU6 105 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 GSPT2Q8IYD1 628 aaKnown RBP16.85■□□□□ 0.29
LINC00963-208ENST00000454968 AGGF1Q8N302 714 aaeCLIP16.85■□□□□ 0.291e-6■■■□□ 16.6
LINC00963-208ENST00000454968 UCMAQ8WVF2 138 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 PTPRN2Q92932 1015 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 EXOC2Q96KP1 924 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 TUBGCP5Q96RT8 1024 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 TDRD1Q9BXT4 1180 aaKnown RBP16.85■□□□□ 0.29
LINC00963-208ENST00000454968 SCUBE2Q9NQ36 999 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 PLA2G4CQ9UP65 541 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 SORCS3Q9UPU3 1222 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 TTLL3Q9Y4R7 772 aa16.85■□□□□ 0.29
LINC00963-208ENST00000454968 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.84■□□□□ 0.29
LINC00963-208ENST00000454968 TTC24A2A3L6 582 aaPredicted RBP16.84■□□□□ 0.29
LINC00963-208ENST00000454968 AP3B1O00203 1094 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 TRAFD1O14545 582 aaPredicted RBP16.84■□□□□ 0.29
LINC00963-208ENST00000454968 SOCS5O75159 536 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 PRLP01236 227 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 ATXN1LP0C7T5 689 aaKnown RBP16.84■□□□□ 0.29
LINC00963-208ENST00000454968 DRD1P21728 446 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 SARNPP82979 210 aaKnown RBP16.84■□□□□ 0.29
LINC00963-208ENST00000454968 HIF1AQ16665 826 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 BEND6Q5SZJ8 279 aaPredicted RBP16.84■□□□□ 0.29
LINC00963-208ENST00000454968 ATXN7L2Q5T6C5 722 aaPredicted RBP16.84■□□□□ 0.29
LINC00963-208ENST00000454968 FSTL4Q6MZW2 842 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 CEP128Q6ZU80 1094 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 TMC3Q7Z5M5 1100 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 ZNF687Q8N1G0 1237 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 MREGQ8N565 214 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 ECHDC3Q96DC8 303 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 LRRC39Q96DD0 335 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 PWWP2AQ96N64 755 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 WDR83Q9BRX9 315 aaKnown RBP16.84■□□□□ 0.29
LINC00963-208ENST00000454968 TM6SF2Q9BZW4 377 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 UBP1Q9NZI7 540 aa16.84■□□□□ 0.29
LINC00963-208ENST00000454968 TTC34A8MYJ7 566 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 F5H423 210 aaPredicted RBP16.83■□□□□ 0.28
LINC00963-208ENST00000454968 DYNC1I1O14576 645 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 ALOX15BO15296 676 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 PMPCBO75439 489 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 POP4O95707 220 aaKnown RBP16.83■□□□□ 0.28
LINC00963-208ENST00000454968 CCNHP51946 323 aaPredicted RBP16.83■□□□□ 0.28
LINC00963-208ENST00000454968 ARL4CP56559 192 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 ITKQ08881 620 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 GRM3Q14832 879 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 MYLK3Q32MK0 819 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 MAP9Q49MG5 647 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 MSS51Q4VC12 460 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 SLC44A4Q53GD3 710 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 FNBP1LQ5T0N5 605 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 FBXO38Q6PIJ6 1188 aa16.83■□□□□ 0.28
LINC00963-208ENST00000454968 DPY19L3Q6ZPD9 716 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms