RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 C16orf96A6NNT2 1141 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 NEMP1O14524 444 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 TOR1BO14657 336 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 RAD51BO15315 384 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 TCEA3O75764 348 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 CD160O95971 181 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 PRB1P04280 392 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 MMP8P22894 467 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 SDC4P31431 198 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 ADRA1BP35368 520 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 MLLT3P42568 568 aaPredicted RBP11.06□□□□□ -0.64
USP1-204ENST00000452143 ABL2P42684 1182 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 DNA2P51530 1060 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 SNRPD1P62314 119 aaKnown RBP11.06□□□□□ -0.64
USP1-204ENST00000452143 ATP11AP98196 1134 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 RHDQ02161 417 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 ISXQ2M1V0 245 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 C2CD6Q53TS8 623 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 ZNF542PQ5EBM4 170 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 NAA35Q5VZE5 725 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 STRADAQ7RTN6 431 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 NLRP14Q86W24 1093 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 WDR48Q8TAF3 677 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 KCNE4Q8WWG9 221 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 GLMNQ92990 594 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 WBP1Q96G27 269 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 IL12RB2Q99665 862 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 C1QTNF7Q9BXJ2 289 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 DPH1Q9BZG8 443 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 OSBPL2Q9H1P3 480 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 ASCL3Q9NQ33 180 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 METTL5Q9NRN9 209 aaKnown RBP11.06□□□□□ -0.64
USP1-204ENST00000452143 APOBEC3BQ9UH17 382 aaKnown RBP11.06□□□□□ -0.64
USP1-204ENST00000452143 IPO11Q9UI26 975 aaKnown RBP11.06□□□□□ -0.64
USP1-204ENST00000452143 NEU3Q9UQ49 428 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 PCDHGA8Q9Y5G5 932 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 MYO18BQ8IUG5 2567 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 LRRK1Q38SD2 2015 aa11.06□□□□□ -0.64
USP1-204ENST00000452143 IGLON5A6NGN9 336 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 PES1O00541 588 aaKnown RBP11.05□□□□□ -0.64
USP1-204ENST00000452143 MAST4O15021 2626 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 AREL1O15033 823 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 RAMP2O60895 175 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 POP4O95707 220 aaKnown RBP11.05□□□□□ -0.64
USP1-204ENST00000452143 UGT2B4P06133 528 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 MMEP08473 750 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 JUNDP17535 347 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 TGM2P21980 687 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 EEF1GP26641 437 aaKnown RBP11.05□□□□□ -0.64
USP1-204ENST00000452143 ACVRL1P37023 503 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 PTPN9P43378 593 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 RPIAP49247 311 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 THOP1P52888 689 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 GSCP56915 257 aaPredicted RBP11.05□□□□□ -0.64
USP1-204ENST00000452143 YPEL5P62699 121 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 NR0B2Q15466 257 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 CDKN3Q16667 212 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 CDO1Q16878 200 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 DPCR1Q3MIW9 517 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 RWDD4Q6NW29 188 aaKnown RBP11.05□□□□□ -0.64
USP1-204ENST00000452143 GUSBP11Q6P575 273 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 MACC1Q6ZN28 852 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 RBM44Q6ZP01 1051 aaKnown RBP11.05□□□□□ -0.64
USP1-204ENST00000452143 RYBPQ8N488 228 aaPredicted RBP11.05□□□□□ -0.64
USP1-204ENST00000452143 EMC1Q8N766 993 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 OR6K2Q8NGY2 324 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 SNRNP27Q8WVK2 155 aaKnown RBP11.05□□□□□ -0.64
USP1-204ENST00000452143 CASKIN2Q8WXE0 1202 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 CPA5Q8WXQ8 436 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 NAT6Q93015 286 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 NTAN1Q96AB6 310 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 TBC1D31Q96DN5 1066 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 GDAP1L1Q96MZ0 367 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 BOCQ9BWV1 1114 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 NDFIP2Q9NV92 336 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 SPASTQ9UBP0 616 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 KLF15Q9UIH9 416 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 NOCTQ9UK39 431 aaKnown RBP11.05□□□□□ -0.64
USP1-204ENST00000452143 DAAM1Q9Y4D1 1078 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 KIF26BQ2KJY2 2108 aa11.05□□□□□ -0.64
USP1-204ENST00000452143 AHCTF1Q8WYP5 2266 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 C2CD4BA6NLJ0 364 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 LMO7DNF2Z398 122 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 KRIT1O00522 736 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 SPINT1O43278 529 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 LRIG2O94898 1065 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CYP1A1P04798 512 aaPredicted RBP11.04□□□□□ -0.64
USP1-204ENST00000452143 MYF5P13349 255 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 RBMS1P29558 406 aaKnown RBP11.04□□□□□ -0.64
USP1-204ENST00000452143 SUOXP51687 545 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CDR2Q01850 454 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CFHR1Q03591 330 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 EIF2B5Q13144 721 aaKnown RBP11.04□□□□□ -0.64
USP1-204ENST00000452143 DEFB133Q30KQ1 61 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CCDC14Q49A88 953 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 C3orf38Q5JPI3 329 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 CT47A1Q5JQC4 288 aaPredicted RBP11.04□□□□□ -0.64
USP1-204ENST00000452143 TPRG1LQ5T0D9 272 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 C6orf132Q5T0Z8 1188 aa11.04□□□□□ -0.64
USP1-204ENST00000452143 PCSK4Q6UW60 755 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms