RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 OTOGLQ3ZCN5 2332 aa9.32□□□□□ -0.92
RFX3-207ENST00000449190 EP300Q09472 2414 aaPredicted RBP9.32□□□□□ -0.92
RFX3-207ENST00000449190 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 KRIT1O00522 736 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 SMAD6O43541 496 aaKnown RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 SIN3BO75182 1162 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 NDUFS2O75306 463 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 POP4O95707 220 aaKnown RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 GSRP00390 522 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 JCHAINP01591 159 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 RBP3P10745 1247 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 ACADMP11310 421 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 PECAM1P16284 738 aaPredicted RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 CES1P23141 567 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 CD6P30203 668 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 MPLP40238 635 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 MMP13P45452 471 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 MAPK8P45983 427 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 COPAP53621 1224 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 ZBTB16Q05516 673 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 PPIDQ08752 370 aaKnown RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 NSUN2Q08J23 767 aaKnown RBP eCLIP9.31□□□□□ -0.92
RFX3-207ENST00000449190 KLF1Q13351 362 aaPredicted RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 PUM1Q14671 1186 aaKnown RBP eCLIP9.31□□□□□ -0.92
RFX3-207ENST00000449190 CYTH1Q15438 398 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 MYLK3Q32MK0 819 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 FAM46CQ5VWP2 391 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 C22orf39Q6P5X5 142 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 KIAA1324Q6UXG2 1013 aaKnown RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 NYAP1Q6ZVC0 841 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 Q6ZVU0 165 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 PLPP6Q8IY26 295 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 TMEFF1Q8IYR6 380 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 RASGEF1CQ8N431 466 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 ZNF366Q8N895 744 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 C12orf50Q8NA57 414 aaPredicted RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 ACTRT1Q8TDG2 376 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 FRS2Q8WU20 508 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 HTR3CQ8WXA8 447 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 MAML1Q92585 1016 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 ERLEC1Q96DZ1 483 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 MYO19Q96H55 970 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 ZNF419Q96HQ0 510 aaPredicted RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 GDAP1L1Q96MZ0 367 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 OLFM3Q96PB7 478 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 QKIQ96PU8 341 aaKnown RBP eCLIP9.31□□□□□ -0.927e-7■■■■■ 37.3
RFX3-207ENST00000449190 HEPHQ9BQS7 1158 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 TNKS2Q9H2K2 1166 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 PDFQ9HBH1 243 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 NT5MQ9NPB1 228 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 DYRK4Q9NR20 520 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 DLL3Q9NYJ7 618 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 WSB2Q9NYS7 404 aaPredicted RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 USP36Q9P275 1121 aaKnown RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 HECAQ9UBI9 543 aaPredicted RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 TTC7AQ9ULT0 858 aaPredicted RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 CYP8B1Q9UNU6 501 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 ZNF148Q9UQR1 794 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 TTLL3Q9Y4R7 772 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.31□□□□□ -0.92
RFX3-207ENST00000449190 KIAA1549LQ6ZVL6 1849 aa9.31□□□□□ -0.92
RFX3-207ENST00000449190 SDK1Q7Z5N4 2213 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 TCRBV7S2A1N4TA0A589 114 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 CFAP69A5D8W1 941 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 C1QTNF3-AMACRE9PGA6 284 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 KCNK1O00180 336 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 KHNYNO15037 678 aaKnown RBP9.3□□□□□ -0.92
RFX3-207ENST00000449190 ALOX15BO15296 676 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 KCNN4O15554 427 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 URI1O94763 535 aaPredicted RBP9.3□□□□□ -0.92
RFX3-207ENST00000449190 CD160O95971 181 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 IL1BP01584 269 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 IGLV3-19P01714 112 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 DNTTP04053 509 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 PRNPP04156 253 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 STIP1P31948 543 aaKnown RBP9.3□□□□□ -0.92
RFX3-207ENST00000449190 CHRNA3P32297 505 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 ACTN2P35609 894 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 CSNK1DP48730 415 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 IFI35P80217 286 aaPredicted RBP9.3□□□□□ -0.92
RFX3-207ENST00000449190 RPL6Q02878 288 aaKnown RBP9.3□□□□□ -0.92
RFX3-207ENST00000449190 SLC10A7Q0GE19 358 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 CCDC15Q0P6D6 951 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 SNX1Q13596 522 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 TUBB2AQ13885 445 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 ELAVL3Q14576 367 aaKnown RBP9.3□□□□□ -0.92
RFX3-207ENST00000449190 GRM3Q14832 879 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 PRKD1Q15139 912 aaPredicted RBP9.3□□□□□ -0.92
RFX3-207ENST00000449190 CCNG2Q16589 344 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 RSPO4Q2I0M5 234 aaPredicted RBP9.3□□□□□ -0.92
RFX3-207ENST00000449190 CFAP58Q5T655 872 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 C9orf64Q5T6V5 341 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 LYSMD4Q5XG99 296 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 ZNF776Q68DI1 518 aaPredicted RBP9.3□□□□□ -0.92
RFX3-207ENST00000449190 GSTA5Q7RTV2 222 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 PID1Q7Z2X4 250 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 CYP2U1Q7Z449 544 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 SRLQ86TD4 932 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 SYT12Q8IV01 421 aa9.3□□□□□ -0.92
RFX3-207ENST00000449190 STK40Q8N2I9 435 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms