RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.96■□□□□ 0.47
DDX56-207ENST00000448192 SNRNP25Q9BV90 132 aaKnown RBP17.96■□□□□ 0.47
DDX56-207ENST00000448192 DONSONQ9NYP3 566 aa17.96■□□□□ 0.47
DDX56-207ENST00000448192 ITM2BQ9Y287 266 aa17.96■□□□□ 0.47
DDX56-207ENST00000448192 TSPAN6O43657 245 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 MYBL1P10243 752 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 MIPP30301 263 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 DNAJC3Q13217 504 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 SGCGQ13326 291 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 FGL2Q14314 439 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 LRRC73Q5JTD7 316 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 DHRS13Q6UX07 377 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 GCNT7Q6ZNI0 430 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 PTAR1Q7Z6K3 402 aaPredicted RBP17.95■□□□□ 0.46
DDX56-207ENST00000448192 TTC7BQ86TV6 843 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 MARCH9Q86YJ5 346 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 VOPP1Q96AW1 172 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 EXOC2Q96KP1 924 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 KCTD15Q96SI1 283 aaPredicted RBP17.95■□□□□ 0.46
DDX56-207ENST00000448192 MRPL47Q9HD33 250 aaKnown RBP17.95■□□□□ 0.46
DDX56-207ENST00000448192 UBA2Q9UBT2 640 aaPredicted RBP17.95■□□□□ 0.46
DDX56-207ENST00000448192 GGT7Q9UJ14 662 aa17.95■□□□□ 0.46
DDX56-207ENST00000448192 A0A1W2PQJ5 194 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 IGLON5A6NGN9 336 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 A6NNZ2 444 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 EIF3CLB5ME19 914 aaKnown RBP17.94■□□□□ 0.46
DDX56-207ENST00000448192 J3KR12 359 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 RAD51BO15315 384 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 PBX1P40424 430 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 NDST2P52849 883 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 CYTH1Q15438 398 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 HGSNATQ68CP4 663 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 Q6ZSR6 202 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 KANSL1Q7Z3B3 1105 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 ABI3BPQ7Z7G0 1075 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 GALNT15Q8N3T1 639 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 FNIP1Q8TF40 1166 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 ARHGEF26Q96DR7 871 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 BMFQ96LC9 184 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 EIF3CQ99613 913 aaKnown RBP17.94■□□□□ 0.46
DDX56-207ENST00000448192 NCAPGQ9BPX3 1015 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 SLC39A8Q9C0K1 460 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 ISCUQ9H1K1 167 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 LRRC19Q9H756 370 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 KLHL11Q9NVR0 708 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 LHX3Q9UBR4 397 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 HS3ST3A1Q9Y663 406 aa17.94■□□□□ 0.46
DDX56-207ENST00000448192 BZW2Q9Y6E2 419 aaKnown RBP17.94■□□□□ 0.46
DDX56-207ENST00000448192 ZZEF1O43149 2961 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 FAM149AA5PLN7 773 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 POM121BA6NF01 834 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 ARHGAP42A6NI28 874 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 INSIG1O15503 277 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 LRCH4O75427 683 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 PTMSP20962 102 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 PAPOLAP51003 745 aaKnown RBP17.93■□□□□ 0.46
DDX56-207ENST00000448192 RFX8Q6ZV50 586 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 VPS36Q86VN1 386 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 ZSCAN30Q86W11 494 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 SLC22A18ASQ8N1D0 253 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 SLC25A45Q8N413 288 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 FAM174AQ8TBP5 190 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 C1QTNF2Q9BXJ5 285 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 IFNKQ9P0W0 207 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 MFHAS1Q9Y4C4 1052 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 ANKRD36A6QL64 1941 aa17.93■□□□□ 0.46
DDX56-207ENST00000448192 DFFAO00273 331 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 FPGTO14772 594 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 SPINT1O43278 529 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 PRAMEF11O60813 436 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 RFPL3O75679 317 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 SERPING1P05155 500 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 ERCC2P18074 760 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 ZBED6P86452 979 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 NFKBIBQ15653 356 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 ZSCAN23Q3MJ62 389 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 ZNF542PQ5EBM4 170 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 KYAT3Q6YP21 454 aaKnown RBP17.92■□□□□ 0.46
DDX56-207ENST00000448192 CYP4V2Q6ZWL3 525 aaPredicted RBP17.92■□□□□ 0.46
DDX56-207ENST00000448192 DCP2Q8IU60 420 aaKnown RBP17.92■□□□□ 0.46
DDX56-207ENST00000448192 SYN2Q92777 582 aaPredicted RBP17.92■□□□□ 0.46
DDX56-207ENST00000448192 CPEB1Q9BZB8 566 aaKnown RBP17.92■□□□□ 0.46
DDX56-207ENST00000448192 CAAP1Q9H8G2 361 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 PDFQ9HBH1 243 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 DNAJC28Q9NX36 388 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 IPO11Q9UI26 975 aaKnown RBP17.92■□□□□ 0.46
DDX56-207ENST00000448192 CAPN11Q9UMQ6 739 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 ARID1BQ8NFD5 2236 aaPredicted RBP17.92■□□□□ 0.46
DDX56-207ENST00000448192 DMXL2Q8TDJ6 3036 aa17.92■□□□□ 0.46
DDX56-207ENST00000448192 FREM2Q5SZK8 3169 aa17.91■□□□□ 0.46
DDX56-207ENST00000448192 ZFHX4Q86UP3 3567 aa17.91■□□□□ 0.46
DDX56-207ENST00000448192 LRRK1Q38SD2 2015 aa17.91■□□□□ 0.46
DDX56-207ENST00000448192 SRRM3A6NNA2 597 aaPredicted RBP17.91■□□□□ 0.46
DDX56-207ENST00000448192 AREL1O15033 823 aa17.91■□□□□ 0.46
DDX56-207ENST00000448192 FFAR2O15552 330 aa17.91■□□□□ 0.46
DDX56-207ENST00000448192 MMP20O60882 483 aa17.91■□□□□ 0.46
DDX56-207ENST00000448192 PIGNO95427 931 aa17.91■□□□□ 0.46
DDX56-207ENST00000448192 TIMP2P16035 220 aa17.91■□□□□ 0.46
DDX56-207ENST00000448192 ITIH2P19823 946 aa17.91■□□□□ 0.46
DDX56-207ENST00000448192 XPAP23025 273 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms