RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 NPEPPSL1A6NEC2 478 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM90A8PA6NJQ4 464 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 LRRC53A6NM62 1247 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 C2orf81A6NN90 581 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 B3GALNT1O75752 331 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 SPDEFO95238 335 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 CBX6O95503 412 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 CHRM2P08172 466 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM90A13PP0C7W8 464 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM90A24PP0C7X0 464 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 HSPA5P11021 654 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 COMTP21964 271 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 CPT2P23786 658 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 DDX6P26196 483 aaKnown RBP eCLIP4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 GNAQP50148 359 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 ADPRHP54922 357 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 SLC12A2P55011 1212 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 CYP4A11Q02928 519 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZBTB16Q05516 673 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 SEMA3AQ14563 771 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 ADIPOQQ15848 244 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 KRBOX4Q5JUW0 171 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 SERTAD4-AS1Q5TG53 156 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 VWA1Q6PCB0 445 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 SLC2A7Q6PXP3 512 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 MDGA2Q7Z553 956 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 TICAM1Q8IUC6 712 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 TMEM151BQ8IW70 566 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 SYT8Q8NBV8 401 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 MSANTD4Q8NCY6 345 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 FUBP1Q96AE4 644 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 PABPC5Q96DU9 382 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 PGAM5Q96HS1 289 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 KAZALD1Q96I82 304 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 SLC38A3Q99624 504 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 SLC39A3Q9BRY0 314 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 EHD3Q9NZN3 535 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 FZD4Q9ULV1 537 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 A4GNTQ9UNA3 340 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 C2CD2Q9Y426 696 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF536O15090 1300 aa4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 FNDC1Q4ZHG4 1894 aaPredicted RBP4.25□□□□□ -1.73
CDC42BPA-207ENST00000441725 WDR27A2RRH5 827 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 CDRT15L2A8MXV6 281 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 CYP27B1O15528 508 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 PROM1O43490 865 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 LPXNO60711 386 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM20BO75063 409 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 PPFIA2O75334 1257 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 C22orf31O95567 290 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 MT-ND3P03897 115 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 RFPL3SP0C7P2 107 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 MYBL1P10243 752 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 GZMAP12544 262 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ATP6V1B1P15313 513 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZFXP17010 805 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ENGP17813 658 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ACO1P21399 889 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZFP36P26651 326 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 TLX1P31314 330 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 PIP4K2AP48426 406 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 F2RL1P55085 397 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 BFSP1Q12934 665 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 FZD5Q13467 585 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF805Q5CZA5 627 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 RNASE12Q5GAN4 147 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ARL13AQ5H913 290 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 RABL3Q5HYI8 236 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 C9orf152Q5JTZ5 239 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 TXNDC8Q6A555 127 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 JADE1Q6IE81 842 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 NEK8Q86SG6 692 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 GPAT4Q86UL3 456 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 NLRP14Q86W24 1093 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 SYT2Q8N9I0 419 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 BHLHE22Q8NFJ8 381 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 RP9Q8TA86 221 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ELMOD3Q96FG2 381 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 HS6ST2Q96MM7 605 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 CADM1Q9BY67 442 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 DEF6Q9H4E7 631 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ST6GALNAC4Q9H4F1 302 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 WSB2Q9NYS7 404 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 MTRRQ9UBK8 725 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 CTNNAL1Q9UBT7 734 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 HAO1Q9UJM8 370 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 MTMR6Q9Y217 621 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 BRD4O60885 1362 aaPredicted RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 MCIDASD6RGH6 385 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 TAF4O00268 1085 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 STRNO43815 780 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ATP5BP06576 529 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 ADH4P08319 380 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 DLDP09622 509 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 CYP2C18P33260 490 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 HSPA4P34932 840 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 OAZ1P54368 228 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 CFHR3Q02985 330 aa4.24□□□□□ -1.73
CDC42BPA-207ENST00000441725 AP1B1Q10567 949 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms