RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SIRT3Q9NTG7 399 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 IFT80Q9P2H3 777 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 SLC25A13Q9UJS0 675 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 PCDHA7Q9UN72 937 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 DNAJC16Q9Y2G8 782 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 OVOS2A0A0G2JMS6 1433 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 OVOS2A0A0J9YW53 1432 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 TNS3Q68CZ2 1445 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 OVOS2Q6IE36 1432 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 RRBP1Q9P2E9 1410 aaKnown RBP3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 TRBV5-7A0A0A0MS05 114 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 CXorf65A6NEN9 183 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 GTPBP1O00178 669 aaKnown RBP3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 TNFRSF13BO14836 293 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 SEPT4O43236 478 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 HNRNPRO43390 633 aaKnown RBP3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 SLC28A2O43868 658 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 HOXB9P17482 250 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 SLC16A2P36021 539 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 GAD2Q05329 585 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 ZBTB16Q05516 673 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 PPATQ06203 517 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 PMPCAQ10713 525 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 CTXN3Q4LDR2 81 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 WASHC2DQ5SRD0 308 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 RINLQ6ZS11 566 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 RNF144BQ7Z419 303 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 LRRTM4Q86VH4 590 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 ANKRD44Q8N8A2 993 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 PTGR2Q8N8N7 351 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 FAM110DQ8TAY7 271 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 SLC2A12Q8TD20 617 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 LPAR1Q92633 364 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 MAELQ96JY0 434 aaKnown RBP3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 FRMD8Q9BZ67 464 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 TRIM31Q9BZY9 425 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 ISCUQ9H1K1 167 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 ACAD9Q9H845 621 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 MRPL44Q9H9J2 332 aaKnown RBP3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 ZNF304Q9HCX3 659 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 RNF146Q9NTX7 359 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 FBXO4Q9UKT5 387 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 SLC8A2Q9UPR5 921 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 PKP3Q9Y446 797 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 LRRFIP2Q9Y608 721 aaKnown RBP3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 ARHGEF10O15013 1369 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 KIF15Q9NS87 1388 aa3.59□□□□□ -1.83
HMGB3P12-201ENST00000438745 TECPR2O15040 1411 aa3.59□□□□□ -1.84
HMGB3P12-201ENST00000438745 ARHGEF28Q8N1W1 1705 aaKnown RBP3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 NPIPB13A6NJU9 1138 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 NPIPB5A8MRT5 1133 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 NPIPB4C9JG80 1138 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 SYN3O14994 580 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 KLK10O43240 276 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 ANP32CO43423 234 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 CBSLP0DN79 551 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 PRPH2P23942 346 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 CHRNA5P30532 468 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 CBSP35520 551 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 UBE3AQ05086 875 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 TDGQ13569 410 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 PKP1Q13835 747 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 ANKRD1Q15327 319 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 ALFQ53S48 1182 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 RUNDC3AQ59EK9 446 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 ENTPD8Q5MY95 495 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 KIAA1161Q6NSJ0 714 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 HMBOX1Q6NT76 420 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 MTFR2Q6P444 385 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 PDXDC1Q6P996 788 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 AAGABQ6PD74 315 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 ANKS1BQ7Z6G8 1248 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 TMEM200AQ86VY9 491 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 KLBQ86Z14 1044 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 TCP11L2Q8N4U5 519 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 IQCF1Q8N6M8 205 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 ENDOVQ8N8Q3 282 aaKnown RBP3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 USP13Q92995 863 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 ZNF479Q96JC4 524 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 TWNKQ96RR1 684 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 ZPBPQ9BS86 351 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 TMEM204Q9BSN7 226 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 PNRC2Q9NPJ4 139 aaKnown RBP3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 TMLHEQ9NVH6 421 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 THAP1Q9NVV9 213 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 ARL15Q9NXU5 204 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 PLK2Q9NYY3 685 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 TBC1D14Q9P2M4 693 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 CRYL1Q9Y2S2 319 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 IGSF1Q8N6C5 1336 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 NALCNQ8IZF0 1738 aa3.58□□□□□ -1.84
HMGB3P12-201ENST00000438745 RPS10-NUDT3A0A1W2PQS6 291 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 VWA3AA6NCI4 1184 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 C4orf47A7E2U8 309 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 H0YGN5 161 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 EYA2O00167 538 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 PEX12O00623 359 aa3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 MSI1O43347 362 aaKnown RBP3.57□□□□□ -1.84
HMGB3P12-201ENST00000438745 METP08581 1390 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms