RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 NR2C2P49116 596 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 DMPKQ09013 629 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 NAB1Q13506 487 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 LRP8Q14114 963 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 CAPRIN1Q14444 709 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 KIF19Q2TAC6 998 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 PIWIL3Q7Z3Z3 882 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ACOT1Q86TX2 421 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 FAM35AQ86V20 835 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 RAVER1Q8IY67 606 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 KDM1BQ8NB78 822 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ZNF420Q8TAQ5 688 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 NSUN6Q8TEA1 469 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 CCDC138Q96M89 665 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 BEGAINQ9BUH8 593 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 NDEL1Q9GZM8 345 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 PRDM12Q9H4Q4 367 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 PIF1Q9H611 641 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ZNF385DQ9H6B1 395 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 FBRSL1Q9HCM7 1045 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 HESX1Q9UBX0 185 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ZNF70Q9UC06 446 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 TRPC5OSA6NMA1 111 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ZNF701M0R085 212 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 TIMM44O43615 452 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 INHBBP09529 407 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 SBK3P0C264 359 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ADSLP30566 484 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 NSUN2Q08J23 767 aaKnown RBP eCLIP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 SURF1Q15526 300 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 MAPK11Q15759 364 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 C6orf10Q5SRN2 563 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 PPP1R26Q5T8A7 1209 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 CNSTQ6PJW8 725 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ZPBP2Q6X784 338 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 NT5DC4Q86YG4 428 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 EPHX4Q8IUS5 362 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ZBTB8OSQ8IWT0 167 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ANKFN1Q8N957 763 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 FAM151AQ8WW52 585 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 PHF21BQ96EK2 531 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 GLT1D1Q96MS3 346 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 DGCR6LQ9BY27 220 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ING2Q9H160 280 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 PTBP2Q9UKA9 531 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 ITGB1BP2Q9UKP3 347 aa11.67□□□□□ -0.54
HMGCS1-202ENST00000433297 DLGAP1O14490 977 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 TRIM24O15164 1050 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 NRP2O60462 931 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 SNAP91O60641 907 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 GMNNO75496 209 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 YWHAQP27348 245 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 GNL1P36915 607 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 POLR2IP36954 125 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 MLLT10P55197 1068 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 SLC6A3Q01959 620 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 EEPD1Q7L9B9 569 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 CXorf38Q8TB03 319 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 TRUB1Q8WWH5 349 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 FAM149B1Q96BN6 582 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 HPDLQ96IR7 371 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 TBCBQ99426 244 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 POMKQ9H5K3 350 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 TMEM134Q9H6X4 195 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 UTP6Q9NYH9 597 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 ADAM28Q9UKQ2 775 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 XIRP1Q702N8 1843 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 SLC22A2O15244 555 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 INPP4BO15327 924 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 SNAP29O95721 258 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 BMP2P12643 396 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 PSMA4P25789 261 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 TTKP33981 857 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 CTBP1Q13363 440 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 JADE1Q6IE81 842 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 DDIASQ8IXT1 998 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 CMTR2Q8IYT2 770 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 SEPHS2Q99611 448 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 MRPL46Q9H2W6 279 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 SNX25Q9H3E2 840 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 GBA2Q9HCG7 927 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 CHST12Q9NRB3 414 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 IFT80Q9P2H3 777 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 LACTBL1A8MY62 500 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 NR5A2O00482 541 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 MDM4O15151 490 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 DYNC1LI2O43237 492 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 CLASP2O75122 1294 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 MTHFD1P11586 935 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 PABPC1P11940 636 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 OPRL1P41146 370 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 OCA2Q04671 838 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 TNK2Q07912 1038 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 TRAP1Q12931 704 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 ZBTB17Q13105 803 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 MAPRE2Q15555 327 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 CYP51A1Q16850 503 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 GEN1Q17RS7 908 aa11.66□□□□□ -0.54
HMGCS1-202ENST00000433297 ATF7IP2Q5U623 682 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms