RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ECHDC3Q96DC8 303 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 FEM1CQ96JP0 617 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 TBATAQ96M53 351 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 TSGA13Q96PP4 275 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 CSPG4P5Q96PW8 444 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 KCTD15Q96SI1 283 aaPredicted RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 BRD8Q9H0E9 1235 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 C6orf106Q9H6K1 298 aaPredicted RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 TM9SF3Q9HD45 589 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 GPR27Q9NS67 375 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 HECAQ9UBI9 543 aaPredicted RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 UBA2Q9UBT2 640 aaPredicted RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 SERGEFQ9UGK8 458 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 EIF2B4Q9UI10 523 aaKnown RBP9.28□□□□□ -0.92
SMC1A-203ENST00000428014 DNAI1Q9UI46 699 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 SARDHQ9UL12 918 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 INVSQ9Y283 1065 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 SNX10Q9Y5X0 201 aa9.28□□□□□ -0.92
SMC1A-203ENST00000428014 TRPM6Q9BX84 2022 aa9.27□□□□□ -0.92
SMC1A-203ENST00000428014 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.27□□□□□ -0.93
SMC1A-203ENST00000428014 DAPK3O43293 454 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 BUB1O43683 1085 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 GDF9O60383 454 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 SOCS5O75159 536 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 LEFTY1O75610 366 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 TMCC1O94876 653 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 CFIP05156 583 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 ADRB1P08588 477 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 ADRB3P13945 408 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 ZFXP17010 805 aaPredicted RBP9.27□□□□□ -0.93
SMC1A-203ENST00000428014 IL4RP24394 825 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 IL1R2P27930 398 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 CD38P28907 300 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 CYLC1P35663 651 aaPredicted RBP9.27□□□□□ -0.93
SMC1A-203ENST00000428014 TAS2R38P59533 333 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 POLR2LP62875 67 aaKnown RBP9.27□□□□□ -0.93
SMC1A-203ENST00000428014 GRIK2Q13002 908 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 SLC14A2Q15849 920 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 TIGD7Q6NT04 549 aaPredicted RBP9.27□□□□□ -0.93
SMC1A-203ENST00000428014 PHLDB2Q86SQ0 1253 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 MINDY1Q8N5J2 469 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 TEX26Q8N6G2 289 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 HMCESQ96FZ2 354 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 CDC6Q99741 560 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 C1QTNF2Q9BXJ5 285 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 TRIM7Q9C029 511 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 PCDH18Q9HCL0 1135 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 CD93Q9NPY3 652 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 CTTNBP2NLQ9P2B4 639 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 MYO1AQ9UBC5 1043 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 SEPT3Q9UH03 358 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 EFR3BQ9Y2G0 817 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 FADS3Q9Y5Q0 445 aa9.27□□□□□ -0.93
SMC1A-203ENST00000428014 COL5A1P20908 1838 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 KNTC1P50748 2209 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TBC1D3DA0A087WVF3 549 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TBC1D3IA0A087WXS9 549 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TBC1D3EA0A087X179 549 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TBC1D3KA0A087X1G2 549 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 FAM221BA6H8Z2 402 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TBC1D3FA6NER0 549 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 C4orf47A7E2U8 309 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 PATE3B3GLJ2 98 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TBC1D3LB9A6J9 549 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 K7ERQ8 282 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 KPNA3O00505 521 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 DKK1O94907 266 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 KCNK5O95279 499 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TBC1D3HP0C7X1 549 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 VAV1P15498 845 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 CR2P20023 1033 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 HNRNPA2B1P22626 353 aaKnown RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 GLDCP23378 1020 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 ARRB1P49407 418 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 CCT8P50990 548 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 ZNF75DP51815 510 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 RHOAP61586 193 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 GALNT2Q10471 571 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 CA9Q16790 459 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TBC1D3GQ6DHY5 549 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TBC1D3CQ6IPX1 549 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TCEAL6Q6IPX3 200 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 FBXL19Q6PCT2 694 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 LINGO4Q6UY18 593 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 GDPD4Q6W3E5 623 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 BZW1Q7L1Q6 419 aaKnown RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 ABI3BPQ7Z7G0 1075 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TBC1D3Q8IZP1 549 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 SDR16C5Q8N3Y7 309 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 ZCCHC9Q8N567 271 aaKnown RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 RNF214Q8ND24 703 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 BAHD1Q8TBE0 780 aaPredicted RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 SLC35G2Q8TBE7 412 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 GANCQ8TET4 914 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 TCEAL3Q969E4 200 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 MGME1Q9BQP7 344 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 C1QTNF7Q9BXJ2 289 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 SLC39A8Q9C0K1 460 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 MTG2Q9H4K7 406 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms