RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TACR2P21452 398 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 HMOX2P30519 316 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 ABL2P42684 1182 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 SLC34A1Q06495 639 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 LRRC32Q14392 662 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 PHKG1Q16816 387 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 WASHC2DQ5SRD0 308 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 PPP1R15BQ5SWA1 713 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 TPRG1Q6ZUI0 275 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 GLT6D1Q7Z4J2 308 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 SYTL1Q8IYJ3 562 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 NDNQ99608 321 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 OSBPL2Q9H1P3 480 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 CCSER2Q9H7U1 834 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 MIOSQ9NXC5 875 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 EVLQ9UI08 416 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-204ENST00000427724 PKD1L3Q7Z443 1732 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 TMEM247A6NEH6 219 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 FASTKD3Q14CZ7 662 aaKnown RBP10.76□□□□□ -0.69
TCOF1-204ENST00000427724 RASA2Q15283 850 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 RBBP7Q16576 425 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 PLEKHG4Q58EX7 1191 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 LY6G5CQ5SRR4 150 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 PMF1Q6P1K2 205 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 C16orf87Q6PH81 154 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 CYP4X1Q8N118 509 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 ALLCQ8N6M5 410 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 HNRNPABQ99729 332 aaKnown RBP10.76□□□□□ -0.69
TCOF1-204ENST00000427724 ZMYM5Q9UJ78 669 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 ITGB4P16144 1822 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 CCDC189A1A4V9 331 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 C5orf60A6NFR6 353 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 CD72P21854 359 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 ADSSP30520 456 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 RTP2Q5QGT7 225 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 ANKS1BQ7Z6G8 1248 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 TRABD2AQ86V40 505 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 OR7D4Q8NG98 312 aa10.76□□□□□ -0.69
TCOF1-204ENST00000427724 C12orf65Q9H3J6 166 aaKnown RBP10.76□□□□□ -0.69
TCOF1-204ENST00000427724 MARF1Q9Y4F3 1742 aaKnown RBP10.76□□□□□ -0.69
TCOF1-204ENST00000427724 C1orf232A0A0U1RR37 186 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 ADH5P11766 374 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 GRK3P35626 688 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 AQP5P55064 265 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 RPS24P62847 133 aaKnown RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 LCLAT1Q6UWP7 414 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 OTOAQ7RTW8 1153 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 TRIM74Q86UV6 250 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 TRIM73Q86UV7 250 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 C12orf56Q8IXR9 622 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 MAFAQ8NHW3 353 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 SNRNP25Q9BV90 132 aaKnown RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 ST6GALNAC4Q9H4F1 302 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 EBF2Q9HAK2 575 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 FGF10O15520 208 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 SPAG6O75602 509 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 RFX3P48380 749 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 TMEM240Q5SV17 173 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 PIGWQ7Z7B1 504 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 GALNT4Q8N4A0 578 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 FAM13CQ8NE31 585 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 ZMAT2Q96NC0 199 aaKnown RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 SIKE1Q9BRV8 207 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 GALNT8Q9NY28 637 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 CLIC5Q9NZA1 410 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 AGO1Q9UL18 857 aaKnown RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 PCDHGB4Q9UN71 923 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 VPS9D1Q9Y2B5 631 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 SCN9AQ15858 1988 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 SIGLEC16A6NMB1 481 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 YJEFN3A6XGL0 299 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 HEPACAM2A8MVW5 462 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 E7ENQ6 273 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 HCRTO43612 131 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 PDE5AO76074 875 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 CTSAP10619 480 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 KELP23276 732 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 KBTBD12Q3ZCT8 623 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 RNF43Q68DV7 783 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 TAF8Q7Z7C8 310 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 NRSN1Q8IZ57 195 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 ZNF317Q96PQ6 595 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 ZNF184Q99676 751 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 WRAP53Q9BUR4 548 aaKnown RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 LRRC4CQ9HCJ2 640 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 ZDHHC4Q9NPG8 344 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 NMRK1Q9NWW6 199 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 HCSTQ9UBK5 93 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 STARD13Q9Y3M8 1113 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 HCFC2Q9Y5Z7 792 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 SUPT3HB4E1H0 165 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 FCHO1O14526 889 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 VPS26AO75436 327 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 FESP07332 822 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 CD86P42081 329 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 EFTUD2Q15029 972 aaKnown RBP eCLIP10.75□□□□□ -0.692e-6■■■■■ 57.6
TCOF1-204ENST00000427724 KIF19Q2TAC6 998 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 DNAL1Q4LDG9 190 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms